Jatropha Genome Database
- JcCB0030651.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0030651.10 + phase: 0
(1035 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008695 Gibberellin receptor GID1, putative 1235 0.0
29703.m001506 Gibberellin receptor GID1, putative 155 6e-37
>30128.m008695 Gibberellin receptor GID1, putative
Length = 1035
Score = 1235 bits (623), Expect = 0.0
Identities = 923/1023 (90%)
Strand = Plus / Plus
Query: 1 atggctgggagtaatgaagttaatgtcaacgaaagcaagatggtggttcctctgaatacc 60
|||||||| |||||||||||||| |||| |||||||||||||||||||| || || ||
Sbjct: 1 atggctggaagtaatgaagttaacctcaatgaaagcaagatggtggttccactaaacact 60
Query: 61 tgggtcctaatatccaattttaagttggcctacaatcttctccgtcgtcctgatggcact 120
|||||||| || |||||||| ||| |||| ||||| ||||| ||||| ||||||||||||
Sbjct: 61 tgggtcctcatttccaatttcaagctggcttacaaccttcttcgtcgccctgatggcact 120
Query: 121 tttaatcgtcacttggcagagttccttgaccggaaagttcaagccaatgcaaacccagtt 180
|| ||||| ||||||||||||||||||||||||||||||| | | |||||||| ||||||
Sbjct: 121 ttcaatcgccacttggcagagttccttgaccggaaagttccacctaatgcaaatccagtt 180
Query: 181 gatggggttttctcttttgatgttattattgatcgtgggactagcctccttagccggatc 240
|||||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||
Sbjct: 181 gatggggttttctcgtttgatgttgtcattgaccgagggactagcctccttagccggata 240
Query: 241 tatcgaccagcagatggggagcaattacaaccatctatctctgaacttgagaagcctgta 300
||| ||||||| || ||||||||||| |||||| ||| |||||||||||||||||||
Sbjct: 241 tatagaccagctgaaggggagcaattgcaaccaaatattgctgaacttgagaagcctgtg 300
Query: 301 tgctctgagattgtccctgtcattctcttctttcatggcggaagctttgcacattcttct 360
|||||| |||||||||||||||||||||| ||||| ||||| |||||||| || |||
Sbjct: 301 acctctgatgttgtccctgtcattctcttcttccatggtggaagttttgcacactcctct 360
Query: 361 gctaacagtgctatatatgacacgctttgtcgccgactggtgggcatttgcaaggctgtg 420
|| |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 361 gcaaacagtgctatatatgacacactatgtcgccgactggtgggcatttgcagggctgtg 420
Query: 421 gtggtctctgtgaattacaggcgtgcgcctgaaaatcgatatccttgtgcgtacgatgat 480
||||| ||||||||||| || |||||||||||||||||||| || ||||| || ||||||
Sbjct: 421 gtggtttctgtgaattatagacgtgcgcctgaaaatcgatacccatgtgcttatgatgat 480
Query: 481 ggatggacagctcttaagtgggttaactcaagaacatggcttgagagtaagaaagattcg 540
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
Sbjct: 481 ggatggacagctcttaagtgggttaattcaagaacatggctcgagagtaagaaagatgcc 540
Query: 541 aaagttcatatatttttggcaggggatagctctggtggtaacattgtacaccatgttgct 600
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagttcatatgtacttggcaggggatagctctggtggtaacattgtacaccatgttgct 600
Query: 601 ttaagagcagtggagtcaggaattgaagtattgggtaacatattgctcaacccaatgttt 660
||||||||| ||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 601 ttaagagcactggagtcaggaattgaagtattggggaacatactgcttaacccaatgttt 660
Query: 661 ggtgggcaagagagaacagaatcagagaagcgattagatggaaaatattttgtcactctc 720
||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 661 ggtggacaagaaagaacagaatcagagaagcgattagatgggaaatattttgtcacagtt 720
Query: 721 caggaccgggactggtattggagagcttttctccctgaaggagcagacagggatcatcca 780
|| |||||||||||||||||||||||||| |||||||| | |||||| |||||||||||
Sbjct: 721 caagaccgggactggtattggagagctttcctccctgaggaagcagatagggatcatccg 780
Query: 781 gcatgtaatccatttggtccaaaaggtaaaagccttgaaggagtgaaattccccaagaat 840
|||||||||||||||||||||||||| | ||| ||||||||| |||| ||||| ||||
Sbjct: 781 gcatgtaatccatttggtccaaaaggaagaagtcttgaaggaatgaagttcccaaagagc 840
Query: 841 cttgttgtggtggctggtttggaccttattcaagactggcaattggcttatgttgaagga 900
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 841 cttgttgtggtggctggtttggatcttattcaggactggcaattggcttatgttgaaggg 900
Query: 901 cttaagaaggctggtcaagttgtgaaacttctgtatcttgagcaagcaacaattggcttc 960
|| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 901 ctcaaaaaggctggccaagttgtgaaacttctatatcttgagcaagcaacaattggcttc 960
Query: 961 tacttgttgcccaataataatcactttcataccgtcatggatgagataagtaaatttgtg 1020
||||||||||| ||||| ||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 961 tacttgttgcctaataacaatcactttcacacggtcatggatgagataagtgaatttgtg 1020
Query: 1021 tgt 1023
|||
Sbjct: 1021 tgt 1023
>29703.m001506 Gibberellin receptor GID1, putative
Length = 1038
Score = 155 bits (78), Expect = 6e-37
Identities = 465/594 (78%)
Strand = Plus / Plus
Query: 306 tgagattgtccctgtcattctcttctttcatggcggaagctttgcacattcttctgctaa 365
|||||||||||| || ||| |||| |||||||| |||||||| | || || ||||| ||
Sbjct: 306 tgagattgtcccagttattatcttttttcatggtggaagcttcactcactcctctgccaa 365
Query: 366 cagtgctatatatgacacgctttgtcgccgactggtgggcatttgcaaggctgtggtggt 425
|||||||| |||||||| |||||||||| | ||| ||| ||| || || || || ||
Sbjct: 366 tagtgctatctatgacaccttttgtcgccgtttagtgagcacttgtaatgccgttgttgt 425
Query: 426 ctctgtgaattacaggcgtgcgcctgaaaatcgatatccttgtgcgtacgatgatggatg 485
||||| || || | | |||||||| |||| ||||||||||| || |||||||| ||
Sbjct: 426 atctgtcaactatcgtaggtcgcctgaatatcggtatccttgtgcatatgatgatggttg 485
Query: 486 gacagctcttaagtgggttaactcaagaacatggcttgagagtaagaaagattcgaaagt 545
| ||||||| ||||||||||| |||||||| |||||| | ||| |||||||| || ||
Sbjct: 486 ggcagctctaaagtgggttaaatcaagaacttggcttcaaagtggaaaagattcaaaggt 545
Query: 546 tcatatatttttggcaggggatagctctggtggtaacattgtacaccatgttgctttaag 605
|||| ||| ||| || || ||||| || |||||||| || | || ||||| || ||||
Sbjct: 546 tcatgtatatttagctggagatagttcaggtggtaatatagctcatcatgtagcagtaag 605
Query: 606 agcagtggagtcaggaattgaagtattgggtaacatattgctcaacccaatgtttggtgg 665
||||| || | | |||||| ||||||||||| || | || | ||||||||||| ||
Sbjct: 606 agcagcagaagctgaaattgaggtattgggtaatgtacttcttcatccaatgtttggggg 665
Query: 666 gcaagagagaacagaatcagagaagcgattagatggaaaatattttgtcactctccagga 725
||| || ||||| |||||||||||| | |||||||| ||||||||||| || | || ||
Sbjct: 666 gcatgaaagaactgaatcagagaagaggttagatgggaaatattttgtaacaatacaaga 725
Query: 726 ccgggactggtattggagagcttttctccctgaaggagcagacagggatcatccagcatg 785
|| || |||||||||||||| ||||| |||||||| | ||| || |||||||| || ||
Sbjct: 726 tcgtgattggtattggagagcatttctacctgaaggggaagatagagatcatccggcgtg 785
Query: 786 taatccatttggtccaaaaggtaaaagccttgaaggagtgaaattccccaagaatcttgt 845
||| ||| ||||| | | |||| || || | | || |||||||| | ||| ||
Sbjct: 786 caatatattcggtcctagggccaaaaatctccaacaacttaagttccccaaaagtctagt 845
Query: 846 tgtggtggctggtttggaccttattcaagactggcaattggcttatgttgaagg 899
||| |||||||||||||| ||| | ||||| |||||||| ||||||||||||||
Sbjct: 846 tgttgtggctggtttggatcttgtccaagattggcaattagcttatgttgaagg 899
Score = 67.9 bits (34), Expect = 1e-10
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 124 aatcgtcacttggcagagttccttgaccggaaagttcaagccaatgcaaacccagttgat 183
|||||| | ||||| |||||||||||||| |||||| | ||||| | | ||||||||||
Sbjct: 124 aatcgtgatttggcggagttccttgaccgtaaagttaatgccaacaccatcccagttgat 183
Query: 184 ggggttttctcttttgat 201
|| |||||||||||||||
Sbjct: 184 ggtgttttctcttttgat 201