Jatropha Genome Database

JcCB0028471.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0028471.20 + phase: 0 /partial
         (162 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008637 5'->3' exoribonuclease, putative                        105   8e-23

>30128.m008637 5'->3' exoribonuclease, putative
          Length = 2895

 Score =  105 bits (53), Expect = 8e-23
 Identities = 116/137 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcgtgccggcgttttacaggtggctcgcagaccggtatccactagccattgtcgat 60
           ||||||||||| |||||||||||||||||||| |||||||| || ||||| |||||||| 
Sbjct: 1   atgggcgtgccagcgttttacaggtggctcgcggaccggtacccgctagcaattgtcgac 60

                                                                       
Query: 61  gtagttgaagaagaacctaaagaagatgccaatggcgtctctatccctattgatgtctca 120
           || |||||||| ||||| ||||||||   |||||||||   |   ||||||||| |||||
Sbjct: 61  gtggttgaagaggaaccaaaagaagacagcaatggcgtaattggacctattgatatctca 120

                            
Query: 121 agacctaaccctaacgg 137
           | ||||||||| |||||
Sbjct: 121 aaacctaacccgaacgg 137