Jatropha Genome Database
- JcCB0028391.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028391.10 - phase: 0
(819 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30125.m001257 r2r3-myb transcription factor, putative 402 e-111
27956.m000359 r2r3-myb transcription factor, putative 178 3e-44
29706.m001341 r2r3-myb transcription factor, putative 92 6e-18
29212.m000177 r2r3-myb transcription factor, putative 68 9e-11
30076.m004682 r2r3-myb transcription factor, putative 66 4e-10
29739.m003608 r2r3-myb transcription factor, putative 66 4e-10
30147.m013885 r2r3-myb transcription factor, putative 62 6e-09
29005.m000265 r2r3-myb transcription factor, putative 62 6e-09
28154.m000040 r2r3-myb transcription factor, putative 56 3e-07
29680.m001686 r2r3-myb transcription factor, putative 54 1e-06
29889.m003258 r2r3-myb transcription factor, putative 52 5e-06
>30125.m001257 r2r3-myb transcription factor, putative
Length = 960
Score = 402 bits (203), Expect = e-111
Identities = 347/395 (87%)
Strand = Plus / Plus
Query: 1 atgggtcatagatgctgcactaaacagaaagtgaagagagggctatggtcccctgaggaa 60
||||| ||||| || |||| |||||||||||||| |||||| ||||||| ||||| |||
Sbjct: 1 atgggccataggtgttgcagcaaacagaaagtgaaaagagggttatggtctcctgaagaa 60
Query: 61 gatgagaagcttatcaaatatatcaccacctatggccatggaagttggagttctgtccca 120
|| ||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 61 gacgagaagcttggcaagtatatcacaacctacggccatggaagttggagttctgtccca 120
Query: 121 aaacttgcaggcttgcagaggtgtggtaagagttgcagattgagatggataaactatttg 180
|||||||| || ||||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 121 aaacttgctgggctgcagaggtgtggcaaaagttgtagattgagatggataaactacctg 180
Query: 181 aggccagatctcaaaaggggttctttctctgctaatgaagagcaaattataattgatgtt 240
|| |||||||| || |||||| | ||||| || | |||||||| ||||| |||||||||
Sbjct: 181 agaccagatctaaagaggggtaccttctcagcacaagaagagcagattattattgatgtt 240
Query: 241 catagaatattaggcaacagatgggcacaaatagcaaaacatctacctggaaggacagac 300
|||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 241 catagaattttaggtaacagatgggcacaaatagcaaaacatctaccagggaggacagac 300
Query: 301 aacgaagtaaagaatttttggaactcatgcataaagaaaaagctcatttcacaaggttta 360
|||||||| ||||||||||||||||||||||||||||| ||||| || |||||||| ||
Sbjct: 301 aacgaagtgaagaatttttggaactcatgcataaagaagaagctaatctcacaaggcttg 360
Query: 361 gacccaaagactcataacctaatcccttctcatca 395
||||||| ||||| |||||||| |||||||||||
Sbjct: 361 gacccaagaactcacaacctaattccttctcatca 395
>27956.m000359 r2r3-myb transcription factor, putative
Length = 990
Score = 178 bits (90), Expect = 3e-44
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 12 atgctgcactaaacagaaagtgaagagagggctatggtcccctgaggaagatgagaagct 71
|||||||| ||| |||||||| ||||||||| ||||||| ||||| ||||||||||| ||
Sbjct: 12 atgctgcagtaagcagaaagtcaagagagggttatggtctcctgaagaagatgagaaact 71
Query: 72 tatcaaatatatcaccacctatggccatggaagttggagttctgtcccaaaacttgcagg 131
||||| | || || ||| |||| ||||| |||||| |||||||| || ||||||||
Sbjct: 72 aatcaagttcataactacccatggtcatggttcttggagctctgtccctaagcttgcagg 131
Query: 132 cttgcagaggtgtggtaagagttgcagattgagatggataaactatttgaggccagatct 191
||||| |||||||| || ||||||||| ||||||||||||| || |||| ||||||||
Sbjct: 132 gttgcacaggtgtggaaaaagttgcagactgagatggataaattacctgagaccagatct 191
Query: 192 caaaaggggttctttctctgctaatgaagagcaaattataattgatgttcatagaatatt 251
||||| || || || |||| | |||||| | || |||||||||||||||||||
Sbjct: 192 aaaaagagggtcatttactgcacaagaagagaggacaattgttgatgttcatagaatatt 251
Query: 252 aggcaacagatgggcacaaatagcaaaacatctacctggaaggacagacaacgaagtaaa 311
||||||||||||||| |||||||| || ||| ||||||| || || || || ||||| ||
Sbjct: 252 aggcaacagatgggctcaaatagctaagcatttacctggtagaactgataatgaagtcaa 311
Query: 312 gaatttttggaactcatgcataaagaaaaagctcatttcacaaggtttagacccaaagac 371
||| ||||||||| ||||| ||||| ||||| ||| |||| || ||||| || || ||
Sbjct: 312 gaacttttggaacagttgcatcaagaagaagcttattgcacaggggttagatcccaacac 371
Query: 372 tcataa 377
||||||
Sbjct: 372 tcataa 377
>29706.m001341 r2r3-myb transcription factor, putative
Length = 972
Score = 91.7 bits (46), Expect = 6e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 257 acagatgggcacaaatagcaaaacatctacctggaaggacagacaacgaagtaaagaatt 316
||||||||||||| ||||| || ||||| |||||||| ||||| |||||||| ||||| |
Sbjct: 89 acagatgggcacagatagctaagcatctgcctggaagaacagataacgaagtgaagaact 148
Query: 317 tttggaactcatgcataaagaaaaagctcatttc 350
||||||| ||| |||||||||| ||||| |||||
Sbjct: 149 tttggaattcaagcataaagaagaagctaatttc 182
>29212.m000177 r2r3-myb transcription factor, putative
Length = 519
Score = 67.9 bits (34), Expect = 9e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 286 cctggaaggacagacaacgaagtaaagaatttttggaa 323
||||||||||||||||||||| ||||||||||||||||
Sbjct: 46 cctggaaggacagacaacgaaataaagaatttttggaa 83
>30076.m004682 r2r3-myb transcription factor, putative
Length = 282
Score = 65.9 bits (33), Expect = 4e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 138 gaggtgtggtaagagttgcagattgagatggataaactatttgag 182
||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 141 gaggtgtgggaaaagttgcagactgagatggataaactatttgag 185
>29739.m003608 r2r3-myb transcription factor, putative
Length = 267
Score = 65.9 bits (33), Expect = 4e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 137 agaggtgtggtaagagttgcagattgagatggataaactatttgaggccagatctcaaaa 196
|||| |||||||||||||| ||| | |||||| |||||||| ||||||||||| ||||||
Sbjct: 140 agagatgtggtaagagttgtagacttagatggttaaactatctgaggccagatatcaaaa 199
Query: 197 g 197
|
Sbjct: 200 g 200
>30147.m013885 r2r3-myb transcription factor, putative
Length = 1137
Score = 61.9 bits (31), Expect = 6e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 134 tgcagaggtgtggtaagagttgcagattgagatggataaacta 176
|||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 137 tgcaaaggtgtggaaagagttgcagattgagatggattaacta 179
>29005.m000265 r2r3-myb transcription factor, putative
Length = 297
Score = 61.9 bits (31), Expect = 6e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 139 aggtgtggtaagagttgcagattgagatggataaactatttgaggccagat 189
|||||||| ||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 142 aggtgtggaaagagttgcaggctgagatggacaaactatttaaggccagat 192
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 142 tgtggtaagagttgcagattgagatggataaactatttgaggccagatctcaaaag 197
||||| |||||||||||| | ||||||||||| || |||||||| ||||| |||||
Sbjct: 145 tgtggcaagagttgcagactcagatggataaattacttgaggcctgatcttaaaag 200
>29680.m001686 r2r3-myb transcription factor, putative
Length = 543
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 139 aggtgtggtaagagttgcagattgagatggataaactatttgaggccagat 189
|||||||| ||||||||||| | |||||||||||||| |||||||||||
Sbjct: 142 aggtgtggaaagagttgcaggcttagatggataaactacctgaggccagat 192
>29889.m003258 r2r3-myb transcription factor, putative
Length = 996
Score = 52.0 bits (26), Expect = 5e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 139 aggtgtggtaagagttgcagattgagatggataaacta 176
|||||||| |||||||||||| |||||||||| |||||
Sbjct: 142 aggtgtggcaagagttgcagactgagatggattaacta 179