Jatropha Genome Database
- JcCB0028271.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028271.30 + phase: 0 /partial
(2016 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014228 calcium ion binding protein, putative 745 0.0
29830.m001456 conserved hypothetical protein 80 6e-14
>30170.m014228 calcium ion binding protein, putative
Length = 3021
Score = 745 bits (376), Expect = 0.0
Identities = 834/988 (84%), Gaps = 9/988 (0%)
Strand = Plus / Plus
Query: 1013 ctgttaagtccaactcacttgattcactgcagaatgcttttgcaacgcaacctctaggtg 1072
||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 956 ctgttaagtccaactcacttgattcactgcagagtgcttatgcgatgcaacctctaggtg 1015
Query: 1073 gtcagcttcaacgagcccaatcgctcccaacttcaggccagcaggtttctacttcaactt 1132
|||||||||| ||| | ||||| || ||||| ||||| || |||||||| |||||| ||
Sbjct: 1016 gtcagcttcagcgaacacaatcactgccaacgtcaggtcaacaggtttcaacttcagttt 1075
Query: 1133 cttcttcactcacctcgcctagcatgtcagttggaattggaaatttgtctgataattcgc 1192
|||| ||| | | || |||||||| ||||||||| ||||||||| ||||||||||| |
Sbjct: 1076 cttcctcagttgcatctcctagcatttcagttggagttggaaattcatctgataattcac 1135
Query: 1193 agcttcagtggccaaaaatgaaagctttggatattcagaaatatactaaagtttttatgg 1252
||| || |||||||| |||||| | | ||| ||||||| ||||||||||| |||||||
Sbjct: 1136 agcctccatggccaaagatgaaaccatcagatgttcagaagtatactaaagtgtttatgg 1195
Query: 1253 aagtagatactgacagagatggaaggatcaccggtgagcaggcacggaatctattcttga 1312
|||||||||| |||||||||||||| || || ||||||||||| || |||||||| ||||
Sbjct: 1196 aagtagataccgacagagatggaagaattactggtgagcaggcgcgtaatctatttttga 1255
Query: 1313 gttgggggcttccacgtgaggttttgaagcaggtatgggacttatctgatcaggatagtg 1372
| ||| |||| ||| | ||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 1256 gctggaggctaccaagagaggttttgaagcaggtgtgggacttatctgatcaagacagtg 1315
Query: 1373 atagcatgctttctttgagggaattctgctttgctctttatttgatggagcagtacatgg 1432
||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||
Sbjct: 1316 atagcatgctttctttgagggaattctgcttcgcactttatttgatggagcggtacaggg 1375
Query: 1433 ccggtcgctctcttccatcatcgcttccaagtaatgttatgttggatgagacacttctgt 1492
|||| | |||||| |||| |||||||||| ||||||| ||||||||||| ||||
Sbjct: 1376 aaggtctccgtcttccggcatctcttccaagtagcattatgtttgatgagacactactgt 1435
Query: 1493 ccatgacaggtcaaccaaaagttgcttatggaaatgcagcatggggtcctagacctggtt 1552
|||||||||||||||||||| || | |||||||||| ||||||||||| | |||||||
Sbjct: 1436 ccatgacaggtcaaccaaaacttattcatggaaatgccgcatggggtcccaatcctggtt 1495
Query: 1553 ttggaatgcagcctggaatggttactcaaccgatagctcctgccactggtttgaggcccc 1612
||||| |||||||||||||| | ||| | || || |||||||| ||||||||||| |
Sbjct: 1496 ttggacagcagcctggaatgggtgctcggtcaatggcccctgccacaggtttgaggccac 1555
Query: 1613 cagttccagtgactgccccccaagccaagcctgatggagtcatgatatctaatcagcaga 1672
|||||| |||| |||||| |||||||| | || ||||||||||||| ||||
Sbjct: 1556 cagttcaagtggctgccc---------agcctgatagtgtattgatatctaatcaacaga 1606
Query: 1673 agccaagggcacctgttttagaggattcctttaggaaccaaagtgatgagggggtgcaga 1732
||||||| ||||||| ||| |||||||||||| ||||||||| || |||| ||| |
Sbjct: 1607 agccaagagcacctgctttggaggattcctttctgaaccaaagcgacactggggggcaaa 1666
Query: 1733 attcattgcctcaggatggaacagtgtcagagaaaaaggttgatgaaccagagaaggtta 1792
| ||| ||| |||||||| | |||||||| ||||||| |||| |||||||||| |
Sbjct: 1667 actcaatgcaaacagatggaactgcttcagagaacaaggttggtgaatcagagaaggtga 1726
Query: 1793 ttttggattcgaaagagaagattgagttttatcgcactaaaatgcaggaccttgttcttt 1852
|||||||||| ||||||||||||||||| || || | |||||||||||||||||||||||
Sbjct: 1727 ttttggattcaaaagagaagattgagttctaccggagtaaaatgcaggaccttgttcttt 1786
Query: 1853 acaaaagcagatgcgaaaataagctgaatgagatcacagaaagggcattggcagataaac 1912
| ||||||||||| || |||| ||||| || |||||||||||||| ||||||||||| |
Sbjct: 1787 ataaaagcagatgtgacaatagactgaacgaaatcacagaaagggccttggcagataagc 1846
Query: 1913 gtgaggcagagatgttgggcaagaaatatgaagagaagtacaagcaagttgcagaagttg 1972
||||||| ||||| |||| || || ||||||||||| |||||||||||||||||||| |
Sbjct: 1847 gtgaggctgagatactgggtaaaaagtatgaagagaaatacaagcaagttgcagaagtag 1906
Query: 1973 catctaaattaactattgaagaggccac 2000
||||||||||||| ||||||||||||||
Sbjct: 1907 catctaaattaacaattgaagaggccac 1934
Score = 369 bits (186), Expect = e-101
Identities = 491/594 (82%), Gaps = 9/594 (1%)
Strand = Plus / Plus
Query: 25 aacatggatcaattcgaagcttactttaggagagcagatttagatggagatggcaggatt 84
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 16 aacatggatcagttcgaagcttactttaggagagcagatttagatggagatggcagaatc 75
Query: 85 agcggagctgaagctgtggctttctttcaaggatccaatttgcccaaacaagttcttgct 144
|||||| | |||||||| ||| ||||||||| | ||||| || |||||||| ||||||
Sbjct: 76 agcggaaccgaagctgttaatttttttcaaggagcgaatttaccaaaacaagtccttgct 135
Query: 145 cagatatggacatatgctgatcagagtcgcattggctttcttggtcgggcagaattttac 204
|||||||||| |||||||||||||||||| |||||| |||||||| | |||||||
Sbjct: 136 cagatatggatgcatgctgatcagagtcgcactggcttccttggtcgtcctgaatttttt 195
Query: 205 aatgctctcagacttgtgaccgtggcacagactaaaagagaactgacacctgacattgtc 264
|||||||||| |||||| || || || |||| |||||||||| |||||||||| ||||||
Sbjct: 196 aatgctctcaaacttgtaactgttgctcagagtaaaagagaattgacacctgatattgtc 255
Query: 265 aaggcagcattatatggccctgctgcagctaaaatcccagcaccgaaaattaatcttcca 324
||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||||| |
Sbjct: 256 aaggcagcattatatggtcctgctgctgctaaaatcccaccacctaaaattaatcttcta 315
Query: 325 gccactcctgtgctgcatgtgcctcaggtaaacccagtggttgcagcatctgccccacag 384
|||||||| ||||| |||||||| ||| || | | |||||||||| |||
Sbjct: 316 gccactcc---------tgtgcaacaggtaaatccaatgatgactccatctgcccctcag 366
Query: 385 atgggcacagtggccccaacagcatctcaaaatcctggcttcagaggcccaggagttcca 444
||||| || |||||||| || ||| | || |||||| ||||| |||||| |||||
Sbjct: 367 atgggtgcacctcccccaacaccagttcagagtcttggctttagagggccaggacttcca 426
Query: 445 aatcctggtatgaaccagcattactttcctcctcaacaaagtccatcaattagaccacct 504
||| ||||||| |||||||| ||||||||| ||| |||||||| | || |||||||||
Sbjct: 427 aatgctggtataaaccagcagtactttccttctccacaaagtcagaccatgagaccacct 486
Query: 505 caggcgatccaacctggagcttcttcccatccccctcagggcttcattagtccagaattc 564
||||| || | |||||| | |||||| |||| |||||||| | | || |||||| |||
Sbjct: 487 caggctattcctcctggaattgcttcccgtcccactcagggcattactaatccagagttc 546
Query: 565 tctagaggaggtggtatggttggtaattctcaggctatgcctacaggtactgct 618
||||||||| || ||||| | ||| ||||||||| | ||||||| |||||||||
Sbjct: 547 tctagaggaagtagtatgatgggtcattctcaggttgtgcctactggtactgct 600
>29830.m001456 conserved hypothetical protein
Length = 1788
Score = 79.8 bits (40), Expect = 6e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 55 agagcagatttagatggagatggcaggattagcggagctgaagctgtggctttctttcaa 114
||||||||||||||| | ||||| ||| || |||||||||||||| ||||| || |||
Sbjct: 40 agagcagatttagattgcgatggtcagatcagtggagctgaagctgttgcttttttccaa 99
Query: 115 ggatccaatttgcccaaacaagttcttgctcagatatggacatatgctgatcagag 170
|| || ||| ||||||||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 100 ggttctggtttacccaaacaagtccttgctcaggtgtggacttatgctgatcagag 155
Score = 75.8 bits (38), Expect = 9e-13
Identities = 161/202 (79%)
Strand = Plus / Plus
Query: 1222 gatattcagaaatatactaaagtttttatggaagtagatactgacagagatggaaggatc 1281
|||||||| || |||| ||||||||| || |||| || || || |||||||||| ||
Sbjct: 1174 gatattcaaaagtatatgaaagtttttgtgcaagtggacacagatagagatggaaaaata 1233
Query: 1282 accggtgagcaggcacggaatctattcttgagttgggggcttccacgtgaggttttgaag 1341
|| ||||| || ||||| || || ||||| || ||| |||| ||| | ||||| || ||
Sbjct: 1234 actggtgaacaagcacgcaacctgttcttaagctggaggctgccaagagaggtcttaaaa 1293
Query: 1342 caggtatgggacttatctgatcaggatagtgatagcatgctttctttgagggaattctgc 1401
||||| ||||||||||| ||||| |||| ||| || ||||| ||||| ||||| |||||
Sbjct: 1294 caggtgtgggacttatccgatcaagataatgacagtatgctatctttaagggagttctgt 1353
Query: 1402 tttgctctttatttgatggagc 1423
|||||||||||||||||||
Sbjct: 1354 acagctctttatttgatggagc 1375