Jatropha Genome Database
- JcCB0028271.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028271.20 + phase: 0
(1761 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013708 pentatricopeptide repeat-containing protein, putative 648 0.0
30170.m013792 hypothetical protein 252 6e-66
>30170.m013708 pentatricopeptide repeat-containing protein, putative
Length = 588
Score = 648 bits (327), Expect = 0.0
Identities = 522/587 (88%)
Strand = Plus / Plus
Query: 1175 tgagtaataattgtgatccggatatagatacttataccaaactgatttctgcttttatca 1234
|||| |||||||||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct: 2 tgaggaataattgtgatccagacattaatacttatacgaaactgatttctgcttttatca 61
Query: 1235 aagctcgaaaagtggctgacgcacttgaaatgttggatgaaatgttaggtcagggaattg 1294
||| | ||||||||||||| |||||||||||||||||||| |||||||||| |||||||
Sbjct: 62 aaggtagaaaagtggctgatgcacttgaaatgttggatgagatgttaggtcgaggaattg 121
Query: 1295 taccttcaacagggactgtgacttcttttattgaacctctttgtagctttggtccacccc 1354
|||| ||||||| | | |||||||||||||| |||||||| |||||||||||||| |
Sbjct: 122 tacccacaacaggtgatataacttcttttattgagcctctttgcagctttggtccacctc 181
Query: 1355 atgctgcaatgatgatctacaagagggcaagaaaagctggctgcaaaatatcacttagtg 1414
|||||||||||||||||||||||| ||||||||| ||||| || ||||||||||| | ||
Sbjct: 182 atgctgcaatgatgatctacaagaaggcaagaaaggctggatgtaaaatatcactcactg 241
Query: 1415 cctacaagctattgctgatgcgactttctagatttggaaaatgtggaatgttgttaaata 1474
| || || |||||||||||||| ||||| |||||||| |||||||||||| |||||||||
Sbjct: 242 catataaactattgctgatgcggctttcgagatttggtaaatgtggaatgctgttaaata 301
Query: 1475 tatgggaggagatgcaagaaagtggttattcatctgacatggaagtttatgagtatatca 1534
||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| |||
Sbjct: 302 tatgggatgagatgcaagaaaatggttatacatctgacatggaagtttatgagtatgtca 361
Query: 1535 ttaatggactttgcaacatagggcagcttgaaaatgctgtacttgtgatggaagaatctt 1594
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 362 ttaatggactttgcaatatagggcagcttgaaaatgctgtactagtgatggaagaatctc 421
Query: 1595 tgcacaagggcttctgcccaagcagactcatctacagcaaactatataataagctacttg 1654
||||||||||||| || |||||||||||||| || ||||||||| |||| || |||||||
Sbjct: 422 tgcacaagggcttttgtccaagcagactcatatatagcaaactaaataacaaactacttg 481
Query: 1655 cttcaaataaagtagagagagcatacaaactctttttgaagattaaagctgctcgcagca 1714
|||||| ||||||||| ||||||||||| || | ||||||| | | || |||||| ||
Sbjct: 482 cttcaagtaaagtagaaagagcatacaagctatatttgaaggtcagagatgctcgttcca 541
Query: 1715 atgaaaatgcacggagattttggcgcgctaatggctggcatttttga 1761
|||||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 542 atgaaaatgctcgcagattttggcgtgctaatggctggcacttttga 588
>30170.m013792 hypothetical protein
Length = 732
Score = 252 bits (127), Expect = 6e-66
Identities = 344/415 (82%), Gaps = 1/415 (0%)
Strand = Plus / Plus
Query: 379 gaagagaagttgagaggggtatttcttcaaaaattaaatggaaaatcagcaattgaaagt 438
||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||| | |
Sbjct: 319 gaagataaattgagaggggtatttctgcaaaaattaaagggaaaatcagcaattgagaat 378
Query: 439 gctctagcgaacactggcgtggatttgagcctggatgttgttgctaaaacactgtacaga 498
||| ||| ||| | ||| ||||| |||||| | ||||||||||| || |||| | |||
Sbjct: 379 gctttagggaaaattggtgtggacttgagcatagatgttgttgccaatgtactggataga 438
Query: 499 gggaacttaggaggcgaagcaatggttatcttcttcaattgggcaatcaaacagccaatg 558
|||||| | ||||| ||||||||| |||||||||| |||||||| || |||||||| | |
Sbjct: 439 gggaacctgggaggtgaagcaatgattatcttctttaattgggcgattaaacagccgacg 498
Query: 559 atacccaaggatattcatagctataacgtaattcttagggctctgggcaaaaagaaattt 618
|| || ||||| |||||||| |||||||| | ||||||| || |||| || |||||||
Sbjct: 499 attcctaaggacattcatagttataacgttctcattagggcactaggcagaaggaaattt 558
Query: 619 attgattttatgctgaaaatgttgcgtgacttgaggacagaaggtatcactgttaacttg 678
||||| ||| |||||||| | ||| ||| |||| | |||||| ||| | |||||| |||
Sbjct: 559 attgactttgtgctgaaagttttggttgatttgaaggcagaagatataaatgttaatttg 618
Query: 679 gagaccttatcaattgtagcggatggtttagttagggctcaacgagtgtataaagcaatt 738
||||||||||||||||| ||| | ||| ||||||| | || |||||||||||| |||
Sbjct: 619 gagaccttatcaattgttatggacagcttacttagggcccgacaagtgtataaagctatt 678
Query: 739 caaatatttggaaacacagaagagtttggatttggatgtgatacagagtctttga 793
||||| ||||||||| ||| |||||||||||||| ||||||||| || |||||||
Sbjct: 679 caaatgtttggaaactcag-agagtttggatttgaatgtgatactgaatctttga 732