Jatropha Genome Database
- JcCB0028241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0028241.10 + phase: 0
(753 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27467.m000162 Allene oxide cyclase 4, chloroplast precursor, put... 329 1e-89
29738.m001053 Allene oxide cyclase 3, chloroplast precursor, put... 92 6e-18
>27467.m000162 Allene oxide cyclase 4, chloroplast precursor,
putative
Length = 792
Score = 329 bits (166), Expect = 1e-89
Identities = 432/520 (83%), Gaps = 3/520 (0%)
Strand = Plus / Plus
Query: 236 ttcaagaactgcatgtttatgagatcaatgagagagatcggggaagtcccgcctatcttc 295
|||| |||||| ||||||||||||||||||||||||||| |||||||| || ||||| |
Sbjct: 272 ttcaggaactgtgtgtttatgagatcaatgagagagatcgtggaagtccagcttatctcc 331
Query: 296 gattgagccagaaagaagttaattctcttggagatcttgtgccttttagcaacaaacttt 355
| |||||||||||| |||| ||||||||||| |||||||| |||||||||||||| || |
Sbjct: 332 gtttgagccagaaacaagtcaattctcttggcgatcttgttccttttagcaacaagctct 391
Query: 356 acaccggggacctgcaaaagcggataggaataacagcaggaatatgcattttgatcgaac 415
||||||| |||||||| || ||||||||||||||||||| ||||||||||| ||| ||
Sbjct: 392 acaccggcgacctgcagcagaggataggaataacagcagggatatgcattttaatccaaa 451
Query: 416 acaaagcggaaaagaaaggtgaccggtatgaagcaatatacagcttttatttcggggatt 475
||||| |||||| |||||||||| |||| || ||||| |||||||| || ||||| || |
Sbjct: 452 acaaaccggaaatgaaaggtgacaggtacgaggcaatctacagcttctacttcggagact 511
Query: 476 atggtcatatagcggtgcaaggggcatatttgacttatgaggactcgtatcttgctgtga 535
| ||||| | || ||||| || | || ||||||| |||||| |||||||||||||||
Sbjct: 512 acggtcacttggctgtgcagggaccttacttgactttcgaggacacgtatcttgctgtga 571
Query: 536 ctggtgggacgggaatattcgaaggggtgtcgggtcaagttaagctccggcagcttattt 595
|||||||| | || || || ||||| | | ||||||||||| |||| ||| || |||
Sbjct: 572 ctggtgggtcaggcatttttgaaggagcctatggtcaagttaaactccagcaaattgttt 631
Query: 596 tccctttcaagctattttataccttttatttaaaggggattaa---ggatttgcccgagg 652
|||| |||||||| ||||| ||||||||||| ||||| | || ||||||||||| |
Sbjct: 632 tcccattcaagctcttttacaccttttatttgaagggtttaaaaactgatttgcccgacg 691
Query: 653 aattggttgggaagccggttgaaccacacccagctgttgagccccaccctgatgctaagg 712
| || || ||||||| ||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 692 agctgcttaggaagccaactgagccacacccagctgttgagccacaccctgatgccaagg 751
Query: 713 cttgccaaccacatgctgctcttgttaattttactgatta 752
| ||||| || |||||| || ||| |||||||||||||||
Sbjct: 752 cctgccagcctcatgctactgttgctaattttactgatta 791
>29738.m001053 Allene oxide cyclase 3, chloroplast precursor,
putative
Length = 780
Score = 91.7 bits (46), Expect = 6e-18
Identities = 157/194 (80%)
Strand = Plus / Plus
Query: 424 gaaaagaaaggtgaccggtatgaagcaatatacagcttttatttcggggattatggtcat 483
|||||||| |||||||| || ||||||||||| ||||| || || || |||||||| |||
Sbjct: 451 gaaaagaatggtgaccgatacgaagcaatatatagcttctactttggtgattatgggcat 510
Query: 484 atagcggtgcaaggggcatatttgacttatgaggactcgtatcttgctgtgactggtggg 543
||| | || ||||| |||||||| || ||||| ||| | ||| | ||||||||||||||
Sbjct: 511 atatcagttcaaggagcatatttaacctatgatgacacttatttagctgtgactggtgga 570
Query: 544 acgggaatattcgaaggggtgtcgggtcaagttaagctccggcagcttattttccctttc 603
|| ||||| || ||||| |||| || || || ||||| | ||| || ||||||||| |
Sbjct: 571 actggaatctttgaaggagtgtacggacaggtcaagctgcatcagattgttttcccttac 630
Query: 604 aagctattttatac 617
||||| ||||||||
Sbjct: 631 aagcttttttatac 644