Jatropha Genome Database

JcCB0027461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0027461.10 - phase: 0 /partial
         (165 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m001969 UDP-n-acteylglucosamine pyrophosphorylase, putative     115   8e-26

>29648.m001969 UDP-n-acteylglucosamine pyrophosphorylase, putative
          Length = 1869

 Score =  115 bits (58), Expect = 8e-26
 Identities = 120/143 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtaaaagtaggaggttctgtgcagaacaagggttggatcatcgaaagtgttgactacaaa 60
            |||||||| |||||| | |||||||||||||| |||||| | |||| ||| |||||||||
Sbjct: 1702 gtaaaagttggaggtgcagtgcagaacaagggctggatccttgaaaatgtcgactacaaa 1761

                                                                        
Query: 61   gatacctcagtacccgaagagataaggatcaggggtttcagaatcnnnnnnntcgagcag 120
            ||||| |||||||| || |||||||||| |||||| |||||||||       | ||||||
Sbjct: 1762 gatacttcagtacctgaggagataaggaccaggggcttcagaatcaaaaaaattgagcag 1821

                                   
Query: 121  ctcgagaagcattatagtgagcc 143
            |||||||| |||||| |||||||
Sbjct: 1822 ctcgagaaacattattgtgagcc 1844