Jatropha Genome Database
- JcCB0027381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0027381.10 - phase: 0 /partial
(413 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004535 Endosomal P24A protein precursor, putative 379 e-105
29687.m000568 Endosomal P24A protein precursor, putative 139 1e-32
>29848.m004535 Endosomal P24A protein precursor, putative
Length = 1938
Score = 379 bits (191), Expect = e-105
Identities = 308/347 (88%)
Strand = Plus / Plus
Query: 59 cgtttctgattctgatccatggcggtcactgcttctaccttcccggtgttgctcctgagg 118
|||||||| |||| || || ||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 59 cgtttctgtttctaattcacagcgctcactgcttttaccttcctggtgttgctcctgagg 118
Query: 119 atttcgtaaagggagatgagttgaaagtgaaagtgaacaaattgacatctacaaagacac 178
||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||| |
Sbjct: 119 atttcgtcaagggagatgagttgaaggtcaaagtgaacaagttgacctctacaaagacgc 178
Query: 179 agcttccttactcgtattattctctcccttattgtcgcccaaccaagatagtggacagtg 238
| ||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||
Sbjct: 179 aacttccttactcgtattattctcttccttattgtcacccatccaagattgtagacagtg 238
Query: 239 cagagaatcttggggaagtacttcgtggtgaccgcattgaaaattctccctatgtgttta 298
||||||||||||||||||| || || ||||| |||||||||||||| |||||||||||||
Sbjct: 239 cagagaatcttggggaagtgctacgcggtgatcgcattgaaaattccccctatgtgttta 298
Query: 299 aaatgcgggagcaaaagatgtgcaatatcgtttgccgtcttaaacttgatgccaagactg 358
|||||||||||| ||||||||| ||| | |||||||| | ||| |||||||||| ||||
Sbjct: 299 aaatgcgggagccaaagatgtgtaatgttctttgccgtgtaaaatttgatgccaaaactg 358
Query: 359 tgaaggagtttaaggagaggatagatgacgagtatcgagtcaacatg 405
| ||||||||||| |||| ||| |||||||||||||| |||||||||
Sbjct: 359 taaaggagtttaaagagaagatcgatgacgagtatcgggtcaacatg 405
>29687.m000568 Endosomal P24A protein precursor, putative
Length = 1923
Score = 139 bits (70), Expect = 1e-32
Identities = 217/266 (81%)
Strand = Plus / Plus
Query: 140 tgaaagtgaaagtgaacaaattgacatctacaaagacacagcttccttactcgtattatt 199
|||| |||||||| |||||| |||| |||||||| ||||| ||||||||||| || ||||
Sbjct: 125 tgaaggtgaaagtaaacaaactgacttctacaaaaacacaacttccttactcatactatt 184
Query: 200 ctctcccttattgtcgcccaaccaagatagtggacagtgcagagaatcttggggaagtac 259
| |||||||| |||| || ||||| || |||||||| |||||||||||||| |
Sbjct: 185 cgctcccttactgtcatccggagcgcatagttgatagtgcagaaaatcttggggaagttc 244
Query: 260 ttcgtggtgaccgcattgaaaattctccctatgtgtttaaaatgcgggagcaaaagatgt 319
|||||||||||||||| ||||| ||||| || |||||||||||| | || | | | ||||
Sbjct: 245 ttcgtggtgaccgcatagaaaactctccttacgtgtttaaaatgagagaaccacaaatgt 304
Query: 320 gcaatatcgtttgccgtcttaaacttgatgccaagactgtgaaggagtttaaggagagga 379
|||| || | |||||| ||| ||||||||| || |||| ||||| || ||||| | ||
Sbjct: 305 gcaagattttatgccgtattacacttgatgcaaaaactgcaaaggaattcaaggaaaaga 364
Query: 380 tagatgacgagtatcgagtcaacatg 405
||||||| |||||||| |||||||||
Sbjct: 365 tagatgatgagtatcgggtcaacatg 390