Jatropha Genome Database

JcCB0027191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0027191.10 - phase: 0 
         (777 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29738.m001053 Allene oxide cyclase 3, chloroplast precursor, put...   216   1e-55

>29738.m001053 Allene oxide cyclase 3, chloroplast precursor,
           putative
          Length = 780

 Score =  216 bits (109), Expect = 1e-55
 Identities = 261/311 (83%), Gaps = 3/311 (0%)
 Strand = Plus / Plus

                                                                       
Query: 286 aacgagcgagacagagacagcccagcaatcctaaaactaagtaaaaaaccaga---atta 342
           ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||   | ||
Sbjct: 286 aacgaacgagacagggaaagcccagcaatcctaaaactgagtaagaaacctgatcaacta 345

                                                                       
Query: 343 gcacttggagatttagtgcccttcaccaacaagctttactctggagacttacagaaacgg 402
           |||||||| ||| | || || ||||| |||||||| |||||||||||| || ||||| ||
Sbjct: 346 gcacttggcgatcttgttcctttcacaaacaagctctactctggagacctaaagaaaagg 405

                                                                       
Query: 403 ttcggtataactgctggtctctgtgttcttatccaacacgtaccggaaaagaatggcgac 462
           || ||||||||||||||||| |  || |||||| | ||||| || ||||||||||| |||
Sbjct: 406 ttaggtataactgctggtctatcagtacttatcaagcacgtgccagaaaagaatggtgac 465

                                                                       
Query: 463 agatatgaagcaaactacagcttctatttcggtgattatggccatatatccgtacaagga 522
            |||| |||||||  || |||||||| || ||||||||||| |||||||| || ||||||
Sbjct: 466 cgatacgaagcaatatatagcttctactttggtgattatgggcatatatcagttcaagga 525

                                                                       
Query: 523 gcttatttaacctatcaagatacctttttggctgtgaccggtggatctggaatttttgaa 582
           || |||||||||||| | || || | ||| |||||||| |||||| ||||||| ||||||
Sbjct: 526 gcatatttaacctatgatgacacttatttagctgtgactggtggaactggaatctttgaa 585

                      
Query: 583 ggagtgtacgg 593
           |||||||||||
Sbjct: 586 ggagtgtacgg 596