Jatropha Genome Database

JcCB0027171.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0027171.10 + phase: 0 /partial
         (516 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29602.m000211 conserved hypothetical protein                           78   6e-14

>29602.m000211 conserved hypothetical protein
          Length = 1047

 Score = 77.8 bits (39), Expect = 6e-14
 Identities = 102/123 (82%)
 Strand = Plus / Plus

                                                                       
Query: 22  caaggtatatattgcagatatcacaaatctaaagcatcagaagtatattcaaccacacga 81
           ||||| ||||||||||| | ||||||||| |||||||||||  ||| ||| || |  |||
Sbjct: 727 caagggatatattgcaggtttcacaaatcaaaagcatcagagatattttccacaaagcga 786

                                                                       
Query: 82  actgagctcagaggagggaacttgaagactgcatttagagatactcttaagtcacaaggc 141
           ||||||||||  || ||||||||||  || || ||||| ||| |||| ||||||||||||
Sbjct: 787 actgagctcaagggcgggaacttgagaacagcctttagggatcctctcaagtcacaaggc 846

              
Query: 142 att 144
           |||
Sbjct: 847 att 849