Jatropha Genome Database
- JcCB0027041.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0027041.20 - phase: 0
(1818 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30068.m002598 starch synthase, putative 1035 0.0
29866.m000609 starch synthase, putative 244 2e-63
>30068.m002598 starch synthase, putative
Length = 1581
Score = 1035 bits (522), Expect = 0.0
Identities = 834/938 (88%)
Strand = Plus / Plus
Query: 763 gttgccttttgcatccacaacattgcatatcagggcagatttgccttctcagacttctca 822
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 598 gttgccttttgcatccacaacatcgcataccagggcagatttgccttctcagacttctca 657
Query: 823 cttctcaacttgccagatcaatataagggctcctttgactttatcgatggatataataag 882
||||| || ||||||||||||| || |||||||||||||||| ||||| ||| | |||
Sbjct: 658 cttctaaatttgccagatcaattcaaaagctcctttgactttattgatgggtatgacaag 717
Query: 883 cctgtcaagggaaggaaaatcaattggatgaaggctggaatcttggaatcagacagggtt 942
|| ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 718 ccagtcaacggaaggaaaatcaattggatgaaggctggagttttggaatcagacagggtt 777
Query: 943 ttgactgtgagcccatactatgcccaggaacttgtttctggagaagatagaggtgtggag 1002
||||||||||| ||||||||||| ||||| || ||||||||| || ||||||||||||
Sbjct: 778 ttgactgtgagtccatactatgcagaggaagttatttctggagtggaaagaggtgtggag 837
Query: 1003 ctggataatatcattcgcaaaactggcattactggtattgtaaatggtatggatgtccag 1062
|||||||| ||||| || |||||||| ||| |||| || |||| |||||||||||||||
Sbjct: 838 ctggataacatcatccgtaaaactggtatttctggaatcataaacggtatggatgtccag 897
Query: 1063 gagtggaatcctgctactgacaaatatatagatatcaactatgatgcaacaactgttatg 1122
||||||||||||||||| || ||||| || | ||||||||| ||||| ||||||||||
Sbjct: 898 gagtggaatcctgctacagataaatacattggtatcaactacgatgccacaactgttaca 957
Query: 1123 gatgcaaagcctttattaaaggaagctcttcaagcagaagttgggttgcctgttgacagg 1182
|| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 958 gaagcaaagcctttattgaaggaagcccttcaagcagaagttgggttgcctgttgatagg 1017
Query: 1183 aacattcctttaattggtttcattggtagactagaagagcagaaaggttcagatattctg 1242
|||||||||||||| || |||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1018 aacattcctttaataggattcattggtagattagaagagcagaaaggttcagatatcctt 1077
Query: 1243 gttgcagctatttcacagttggttcaacacaatgtgcaaatagtaatacttggaactggc 1302
||||||||||||||||| |||| | || ||||||||||||| ||||| ||||| ||||||
Sbjct: 1078 gttgcagctatttcacaattggctaaatacaatgtgcaaattgtaatccttggcactggc 1137
Query: 1303 aaaaaaggctttgaaaagcaaattcgacagctggaggtattgtacccagataaggctaga 1362
||||||| |||||||||||| ||| || ||||||||| ||||||| ||||| ||||
Sbjct: 1138 aaaaaagcctttgaaaagcagattgagcaactggaggtactgtaccctgataaatgtaga 1197
Query: 1363 ggagttgcaaaattcaatgtcccgttggcccatatgatcatagctggttctgattttatg 1422
||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 1198 ggagtggcaaaattcaatgtcccattggcccacatgatcattgctggagctgattttatg 1257
Query: 1423 ttgataccaagtagatttgagccctgtggtctcattcaattgcatgctatgcgatatgga 1482
||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 1258 ttgatcccaagtagatttgagccctgcggtctcattcagttgcatgcaatgcgatatgga 1317
Query: 1483 acggtgcccattgttgcttccactggtggtcttgttgacactgttaaagaaggttacaca 1542
|| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1318 acagtccccattgttgcctccactggtggtcttgttgacactgttaatgaaggttacaca 1377
Query: 1543 ggattccaaatgggggccttccacgttgaatgtgacagagttgatccggctgatgtagct 1602
||||| |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1378 ggatttcaaatgggagccttccatgttgaatgcgacagagttgatccagctgatgtagct 1437
Query: 1603 gcagtggttacagctgttgtaagagctcttgccacttatggcaccgttgctttaagagaa 1662
||||| |||| | |||| ||| |||||||||||||||||| ||| | |||||||| ||||
Sbjct: 1438 gcagtagttagaactgtagtacgagctcttgccacttatgccactgctgctttaaaagaa 1497
Query: 1663 atgattctgaactgcatggcccaggatctttcatggaa 1700
||| | |||| ||||||||||| ||| | ||||||||
Sbjct: 1498 atggtcttgaattgcatggcccaagatttctcatggaa 1535
Score = 345 bits (174), Expect = 6e-94
Identities = 327/378 (86%)
Strand = Plus / Plus
Query: 221 tttgtgggcaaggcatgaacttgatctttgttggagctgaagttggtccgtggagcaaaa 280
||||||| ||||| |||||||| | || ||||| |||||||||||||||||||||||||
Sbjct: 221 tttgtggacaaggaatgaacttagtgttcgttggtgctgaagttggtccgtggagcaaaa 280
Query: 281 ctggtggacttggtgatgttcttggaggacttcccccggccatggctgcaagagggcacc 340
|||||||||| || ||||||||||| |||||||| || ||| ||||||||||||| ||||
Sbjct: 281 ctggtggactcggcgatgttcttggtggacttcctcctgccttggctgcaagaggtcacc 340
Query: 341 gggtgatgacagtctctcctcgctatgaccagtacagggacgcatgggacaccagtgtat 400
| || ||||| |||||||| |||||||||||||| | ||| || |||||||| |||| |
Sbjct: 341 gtgtcatgactgtctctccccgctatgaccagtataaggatgcttgggacacatgtgtct 400
Query: 401 tggtgcagattaaagttggggataaaattgaaactgtccgcttcttccactgctacaagc 460
|||| |||||| |||||| || | | |||||||| | |||||||||||||||||||||
Sbjct: 401 tggttgagattacagttggtgacagagttgaaactattcgcttcttccactgctacaaga 460
Query: 461 gaggagttgatcgtgtgttcgtggatcacccaattttccttgagaaggtttggggcaaaa 520
|||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 461 gaggagttgatcgtgtcttcgtcgatcacccaatgttccttgagaaggtgtggggcaaaa 520
Query: 521 ctgggtccaaaatctatggccccagagcaggaatcgattacaaggacaaccaaatgcgat 580
|||| || |||||||||||||| | ||||||| | || ||||| ||||||||| | || |
Sbjct: 521 ctggatctaaaatctatggcccaacagcaggattggactacaaagacaaccaactacgtt 580
Query: 581 ttagcttgttgtgcctag 598
|||||||| |||||||||
Sbjct: 581 ttagcttgctgtgcctag 598
>29866.m000609 starch synthase, putative
Length = 1875
Score = 244 bits (123), Expect = 2e-63
Identities = 483/603 (80%)
Strand = Plus / Plus
Query: 639 caaatatttctcaggaccatatggagaggatgttatcttcattgccaatgattggcacgc 698
|||||| || |||||||||||||| |||||||||||||||||||| |||||||||||| |
Sbjct: 645 caaatacttttcaggaccatatggtgaggatgttatcttcattgctaatgattggcacac 704
Query: 699 tgctattcttccatgttacctaaaatccatttacaaacctatgggaatttaccagagtgc 758
|||| || |||| || || || ||| |||||||| ||| || || || | | ||
Sbjct: 705 tgctcttgttccttgctatctgaaaagtatttacaaggctagagggatctataaaaacgc 764
Query: 759 caaggttgccttttgcatccacaacattgcatatcagggcagatttgccttctcagactt 818
|||||| || || ||||| ||||||||||| || || || |||||||| | |||| ||
Sbjct: 765 caaggtagctttctgcattcacaacattgcctaccaagggagatttgcaattgcagattt 824
Query: 819 ctcacttctcaacttgccagatcaatataagggctcctttgactttatcgatggatataa 878
|||||||| || | ||||| || | ||| | || ||||| ||||| ||||||||| |
Sbjct: 825 ttcacttctaaatcttccagaccagttcaagagatcttttgattttattgatggatatga 884
Query: 879 taagcctgtcaagggaaggaaaatcaattggatgaaggctggaatcttggaatcagacag 938
|| ||||| || |||||||| || || |||||||||||||| || | |||||||||||
Sbjct: 885 caaacctgtgaaaggaaggaagattaactggatgaaggctggcatatcagaatcagacag 944
Query: 939 ggttttgactgtgagcccatactatgcccaggaacttgtttctggagaagatagaggtgt 998
|||| | |||||||||||||||||||| |||||||||| || || | || | ||||||
Sbjct: 945 ggttgtaactgtgagcccatactatgctgaggaacttgtatccggcgtggagaaaggtgt 1004
Query: 999 ggagctggataatatcattcgcaaaactggcattactggtattgtaaatggtatggatgt 1058
||| | || || || |||| | ||||| || | || ||||||||||| ||||||||
Sbjct: 1005 ggaattagagaacatacttcggatgactggaatcatcggaattgtaaatggcatggatgt 1064
Query: 1059 ccaggagtggaatcctgctactgacaaatatatagatatcaactatgatgcaacaactgt 1118
|| ||||||||||| |||| |||||||| || || |||| | |||||| || |||||
Sbjct: 1065 gcaagagtggaatccatctacagacaaatacatcaatgtcaaatttgatgctaccactgt 1124
Query: 1119 tatggatgcaaagcctttattaaaggaagctcttcaagcagaagttgggttgcctgttga 1178
| ||||||||||||| | || |||||||| || ||||| ||||||||||||||||||||
Sbjct: 1125 gacggatgcaaagcctcttttgaaggaagccctgcaagccgaagttgggttgcctgttga 1184
Query: 1179 caggaacattcctttaattggtttcattggtagactagaagagcagaaaggttcagatat 1238
||||| || ||| |||| || |||||||||||||| |||||||||||||||||||| ||
Sbjct: 1185 taggaatatccctgtaataggcttcattggtagacttgaagagcagaaaggttcagacat 1244
Query: 1239 tct 1241
|||
Sbjct: 1245 tct 1247
Score = 170 bits (86), Expect = 2e-41
Identities = 253/308 (82%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 235 atgaacttgatctttgttggagctgaagttggtccgtggagcaaaactggtggacttggt 294
||||| ||||| ||||| ||| |||| |||||||| |||||||||||||||||||| |||
Sbjct: 238 atgaatttgatttttgtcggaactgaggttggtccatggagcaaaactggtggactcggt 297
Query: 295 gatgttcttggaggacttcccccggccatggctgcaagagggcaccgggtgatgacagtc 354
|| |||||||| ||||| || || |||||||| || | |||||||| || ||||| ||
Sbjct: 298 gacgttcttggtggactgccaccagccatggcagccaatgggcaccgtgtcatgaccatc 357
Query: 355 tctcctcgctatgaccagtacagggacgcatgggacaccagtgtattggtgcagattaaa 414
|| || || || |||||||||| ||| || ||||| || | | | || ||| | |||
Sbjct: 358 tcaccacgatacgaccagtacaaggatgcttgggatacaaactttgttgttcaggtgaaa 417
Query: 415 gttggggataaaattgaaactgtccgcttcttccactgct---acaagcgaggagttgat 471
|||||||||| ||| |||||||| |||| ||||||||||| |||| ||||||||||||
Sbjct: 418 gttggggatagaatcgaaactgttcgctacttccactgctgctacaaacgaggagttgat 477
Query: 472 cgtgtgttcgtggatcacccaattttccttgagaaggtttggggcaaaactgggtccaaa 531
||||| || |||||||||||||| ||||| |||||| | ||||| ||||||||||| |||
Sbjct: 478 cgtgtttttgtggatcacccaatgttcctggagaagatatgggggaaaactgggtcaaaa 537
Query: 532 atctatgg 539
|||||||
Sbjct: 538 ctctatgg 545
Score = 103 bits (52), Expect = 4e-21
Identities = 100/116 (86%)
Strand = Plus / Plus
Query: 1369 gcaaaattcaatgtcccgttggcccatatgatcatagctggttctgattttatgttgata 1428
|||||||||||||| || | || ||||||||||||||||| |||||||||| ||| |
Sbjct: 1375 gcaaaattcaatgttcctctagcgcatatgatcatagctggggctgattttatattggtc 1434
Query: 1429 ccaagtagatttgagccctgtggtctcattcaattgcatgctatgcgatatggaac 1484
|| |||||||| ||||| |||||||| ||||| |||||||| ||||||||||||||
Sbjct: 1435 cccagtagattcgagccatgtggtctgattcagttgcatgcaatgcgatatggaac 1490
Score = 77.8 bits (39), Expect = 2e-13
Identities = 84/98 (85%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1492 attgttgcttccactggtggtcttgttgacactgttaaagaaggttacacaggattccaa 1551
||||||||||| |||||||| ||||| ||||||| ||||||||||| ||||| || |||
Sbjct: 1551 attgttgcttcaactggtggacttgtggacactg--aaagaaggttatacaggttttcaa 1608
Query: 1552 atgggggccttccacgttgaatgtgacagagttgatcc 1589
||||| |||||| |||||| ||||| | |||||||||
Sbjct: 1609 atgggtgccttcagcgttgagtgtgataaagttgatcc 1646
Score = 54.0 bits (27), Expect = 3e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1748 ctggcagtgaacctggcgttgaaggggaggagattgctcctctcgctaaggagaatctcg 1807
|||| ||||||||||| ||||||| ||||| ||||||||||| || ||||| ||| | |
Sbjct: 1805 ctggaagtgaacctggaattgaaggagaggaaattgctcctctagccaaggaaaatattg 1864
Query: 1808 ccactcc 1814
|||||||
Sbjct: 1865 ccactcc 1871