Jatropha Genome Database

JcCB0027041.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0027041.10 - phase: 0 
         (1182 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002597 Glucan endo-1,3-beta-glucosidase precursor, putative    458   e-128

>30068.m002597 Glucan endo-1,3-beta-glucosidase precursor, putative
          Length = 1218

 Score =  458 bits (231), Expect = e-128
 Identities = 786/971 (80%)
 Strand = Plus / Plus

                                                                        
Query: 67   gtaatggtagattcaatcgggatcaattacggccagatagcgaacaatcttccctcgccg 126
            |||||||| |||||||| || || |||||||| ||| ||||||| |||||||| || |||
Sbjct: 61   gtaatggtggattcaattggtataaattacggacaggtagcgaataatcttccatcaccg 120

                                                                        
Query: 127  gataatgtagtagcgctggtgaaatcagtgggcgccacaaaggtgaagctgtacgacgca 186
            |||||||||||| | || || |||||| | || || || || || || || |||||||||
Sbjct: 121  gataatgtagtacctctagttaaatcaatcggagctactaaagtaaaactctacgacgca 180

                                                                        
Query: 187  gatccacgggtgcttcgtgcatttgccaacaccggagtggaattcatagtaggacttgga 246
            |||||| ||||||||||||||||||| || || ||||| |||||||| || |||||||||
Sbjct: 181  gatccaagggtgcttcgtgcatttgctaatactggagtagaattcattgtcggacttgga 240

                                                                        
Query: 247  aacgagtatctatcgaagatgagagatccagataaagctcaagcttgggtgaaatcaaac 306
            || ||||| || || || ||||||||||||||||||||||| |||||||| |||||||| 
Sbjct: 241  aatgagtacctttccaaaatgagagatccagataaagctcaggcttgggttaaatcaaat 300

                                                                        
Query: 307  gttcagtgctacttacctgccaccaaaatcacttgcattactgtcggcaacgagatctta 366
            |||||   ||||||||| || ||||||||||| || || ||||| ||||||||  | |||
Sbjct: 301  gttcaagcctacttacccgctaccaaaatcacctgtatcactgttggcaacgaagtttta 360

                                                                        
Query: 367  accttcaacgacacctctctcaccgaccaccttcttcccgcaatgcaaagtgtacacact 426
            ||||| |||||||| ||||| | |||  |||| ||||| ||||||||||| || ||||||
Sbjct: 361  acctttaacgacacttctcttagcgataacctccttcctgcaatgcaaagcgtgcacact 420

                                                                        
Query: 427  gcgcttgtcaatctaggattagacaagcaagtcaccgtcaccaccgctcactctctagcc 486
            |||||||| ||  ||||  | || || || || |  || || || ||||| |||||||||
Sbjct: 421  gcgcttgttaacttagggcttgataaacaggttagtgttacaacagctcattctctagcc 480

                                                                        
Query: 487  attctcgaaacctcttatcctccgtccgcaggagctttccggcgagatctggttggatgc 546
            ||||| ||||||||||||||||| || ||||| ||||| || |||||||| |     || 
Sbjct: 481  attctagaaacctcttatcctccatctgcaggtgcttttcgccgagatcttgccccctgt 540

                                                                        
Query: 547  gttactccaatcttaaattttcatgccaaaactggctcacctttcttgattaacgcttat 606
            ||||||||||| |||||||| || | |||||| || || ||||| |||||||| || || 
Sbjct: 541  gttactccaattttaaatttccacgtcaaaacaggatccccttttttgattaatgcgtac 600

                                                                        
Query: 607  ccatacttcgcctacaagggcaatccaaagcaagtcaatttagatttcgttctcttccag 666
            || || || || ||||| |  ||||| |||||||| | ||||||||| |||||||| || 
Sbjct: 601  ccttattttgcatacaaagcgaatcctaagcaagtgagtttagattttgttctctttcaa 660

                                                                        
Query: 667  cccaatcagggtattgtagatcctgtttccaacctccactacgacaatatgctgtttgct 726
             | ||||| ||| | |||||||| || ||||| || ||||| || || ||| ||||||||
Sbjct: 661  gctaatcaaggtgtcgtagatccagtctccaatctgcactatgataacatgttgtttgct 720

                                                                        
Query: 727  cagatcgacgccgcttacgctgcattatcatccctgggctacaggaagctaccaattcac 786
            ||||||||||| | |||| | || ||||| ||  | || |||| |||| ||||  |||| 
Sbjct: 721  cagatcgacgctgtttactcagctttatcgtctttaggttacaagaagttaccggttcat 780

                                                                        
Query: 787  atatcggaaactggctggccatccaaaggagacgaggacgaggctggagctacgccggag 846
            ||||||||||| || |||||||| |||||||| |  || ||||| || ||||| || || 
Sbjct: 781  atatcggaaaccggttggccatcgaaaggagatggtgatgaggcaggtgctactcctgat 840

                                                                        
Query: 847  aatgccaagaaatacaatggcaacctgattaagctgatttctcaaaagaaggggactcca 906
            ||||| |||||||||||||| || |||||||||   |||| ||||| ||| || ||||||
Sbjct: 841  aatgctaagaaatacaatggaaatctgattaagactatttgtcaaaggaaaggaactcca 900

                                                                        
Query: 907  gcgaggccaaacacagacttgaacatctatgtattcgctttatttaatgagaacatgaag 966
              |||||||| ||| |||||||| || ||||| || ||| ||||||||||||| ||||||
Sbjct: 901  atgaggccaagcactgacttgaatatttatgtgtttgctctatttaatgagaatatgaag 960

                                                                        
Query: 967  cccggaccaacatccgagaggaactacggtctatttaagccggatggaacgccagcgtat 1026
            || ||||| || || ||||| || || ||| ||||||| || |||||||| || || |||
Sbjct: 961  cctggacctacttctgagagaaattatggtttatttaaacctgatggaacccccgcttat 1020

                       
Query: 1027 tcacttggaat 1037
            |||||||||||
Sbjct: 1021 tcacttggaat 1031



 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 1126 ccggagagttcttctactggttacttgtccatttctagcgcaa 1168
            |||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 1102 ccggagagttcttccactggctacttgtccatttctagtgcaa 1144