Jatropha Genome Database
- JcCB0025591.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0025591.20 - phase: 0 /partial
(1645 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29816.m000677 Auxin efflux carrier component, putative 696 0.0
29804.m001502 hypothetical protein 115 9e-25
29662.m000472 Auxin efflux carrier component, putative 56 7e-07
>29816.m000677 Auxin efflux carrier component, putative
Length = 1941
Score = 696 bits (351), Expect = 0.0
Identities = 834/995 (83%)
Strand = Plus / Plus
Query: 1 atgattagctggaatgatctctacaccgttttaacggcggtggttcctctctatgttgct 60
||||||| | |||| ||||||||||||||| |||| ||||||||||| |||||||| ||
Sbjct: 1 atgattaccgggaaggatctctacaccgttctaacagcggtggttccgctctatgtcgcc 60
Query: 61 atgattttggcctacggctctgtgcgctggtggaagattttcagtcccgaccagtgctct 120
||||| || ||||| |||||||| || |||||||| || ||||| || |||||||| ||
Sbjct: 61 atgatcttagcctatggctctgtacggtggtggaaaatattcagccctgaccagtgttcc 120
Query: 121 ggtatcaatcggttcgtggcgatatttgctgttccgcttttgtctttccattttatatct 180
|||||||| |||||||| || || ||||||||||| |||||||| || || || || ||
Sbjct: 121 ggtatcaaccggttcgttgccatttttgctgttccacttttgtcctttcacttcatctca 180
Query: 181 actaatgatccttacgccatgaatttccggtttatcgccgccgatacgcttcagaagatt 240
|||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 181 actaataatccttacgagatgaatttgaggtttatcgccgccgatactcttcagaagatt 240
Query: 241 ataatgttggtcgcgcttggtatttggactaatttcactaaaaatggaagcttagagtgg 300
|||||| | || || |||||| | ||||||||| | |||||||||||||| || || |||
Sbjct: 241 ataatgctagtggcccttggtctctggactaatcttactaaaaatggaagtttggaatgg 300
Query: 301 atgattacaattttctcgttatccactcttccaaacacgcttgttatgggcattcctctg 360
|||||||| |||||||| || || || || || || || ||||| |||||||| ||| ||
Sbjct: 301 atgattactattttctcattgtcaacactgcctaatactcttgtcatgggcatccctttg 360
Query: 361 ttaatcgctatgtacggcgagtattccggtagtctaatggttcaggtggtggttttgcag 420
|||||||||||||| | |||| ||||||| || |||||||| || ||||| ||||||
Sbjct: 361 ttaatcgctatgtatgataagtacgccggtagccttatggttcaagttgtggtattgcag 420
Query: 421 tgtatcatttggtacacgcttctcttatttcttttcgagtacagaggagctaagatgttg 480
||||| ||||||||||||||| | | || ||||| ||||||||||| ||||| ||||||
Sbjct: 421 tgtattatttggtacacgcttttgctgttcctttttgagtacagaggtgctaaaatgttg 480
Query: 481 attatggaacaattccctgaaactgctgcttccattgtgtcctttaaggtcgattcggat 540
|||||||| ||||| |||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 481 attatggagcaatttcctgaaactgctgcttccattgtgtcgtttaaagtggattctgat 540
Query: 541 gtcgtttcgttagatggccaagatttcttagaaactgatgcagaaatcggtgatgatggg 600
|| || || |||||||| ||||||||| ||||||||||| ||||| ||| | ||||||
Sbjct: 541 gttgtctctttagatggaagagatttcttggaaactgatgctgaaattggtaacgatggg 600
Query: 601 aaattacatgtgacagtcagaaaatcgaatgcttcgcggcgatctttggggcccggttca 660
|| |||||||| || || || || || |||||||| || ||||| | || || |||||
Sbjct: 601 aagttacatgttactgtaaggaagtctaatgcttccaggagatctctaggccctggttct 660
Query: 661 ttctctgcattgactccacggccgtctaatctaaccggagctgagatttatagcttgagt 720
|| |||| ||||||||| || || || ||||| || || |||||||||||||| ||||||
Sbjct: 661 ttttctggattgactcctcgtccttccaatcttactggtgctgagatttatagtttgagt 720
Query: 721 tcgtcaagaaatccaactccaagaggttctaattttaacacttctgatttctataatatg 780
||||| ||||||| ||||||||||| || || |||||||| ||||||||||||||||||
Sbjct: 721 tcgtcgcgaaatcctactccaagagggtcgaactttaacacctctgatttctataatatg 780
Query: 781 atgggagtgcaggggtttccaggcggaaggctctcaaatttcggtccggcggatttatat 840
||||| ||||| || ||||| ||||| ||||| || |||||||||||||| ||||| ||
Sbjct: 781 atgggtgtgcaaggatttcctggcggtaggctatcgaatttcggtccggctgatttgtac 840
Query: 841 tccgttcaatcttcaagaggtccaacacctcgtccttcgaactttgaagaaaattgtgct 900
|| || |||||||| |||||||| || |||||||| || || ||||||||||||||||||
Sbjct: 841 tcagtacaatcttctagaggtcctactcctcgtccatccaattttgaagaaaattgtgct 900
Query: 901 ccaatggctaccatatcttctccgagattcgggttttacccggcccagactgtaccaaca 960
||||||||||| || |||||||| |||||||| ||||| || || |||||||| || ||
Sbjct: 901 ccaatggctacaatttcttctcctagattcggattttatcctgcacagactgtgcctacg 960
Query: 961 tcctacccggctccgaatccggaattttcttctac 995
|| || || || ||||||||||| |||||||||||
Sbjct: 961 tcttatccagcgccgaatccggagttttcttctac 995
Score = 525 bits (265), Expect = e-148
Identities = 487/561 (86%)
Strand = Plus / Plus
Query: 1085 caaaccatgatgctaaagaactacacatgtttgtttggagctcaagtgcttcgccggtct 1144
||||||||||||||||||| || || |||||||| |||||||| ||||| || || ||||
Sbjct: 1079 caaaccatgatgctaaagagctgcatatgtttgtatggagctctagtgcgtctcccgtct 1138
Query: 1145 cagacgtttttggagggaatgatttcggagctcctcagcaacctggtcggtctgatcagg 1204
| || || ||||| ||||||||||||||||| | |||||| |||| |||||||||||||
Sbjct: 1139 ctgatgtatttggcgggaatgatttcggagcggcgcagcaatctggccggtctgatcagg 1198
Query: 1205 gagccaaggagattaggatgttggtcgctgaccatccacaaaatggggaaagcaaagcta 1264
| ||||| ||||| |||||||| || ||||| || ||||| |||||||||| ||||| |
Sbjct: 1199 gtgccaaagagatcaggatgttagttgctgatcacccacagaatggggaaacaaaagcaa 1258
Query: 1265 tcgcaaatgctggagattttcctggcgaggacttcagtttcgctggtaaaggagatggag 1324
| ||| ||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct: 1259 ttgcacatgctggagattttcctggtgaggactttagttttgctggtaaaggtgatggag 1318
Query: 1325 aagaagatgataaagaaaaagagggagcgcccggacttaataaactggggtccagttcaa 1384
|||| ||||| | ||||||||| ||| | | ||||||||||||||||||||||| ||||
Sbjct: 1319 aagatgatgagagagaaaaagatggacccactggacttaataaactggggtccagctcaa 1378
Query: 1385 ctgcagagctccacccaaaagttggcggaccacccgagtccggtgccaacaaacaaatgc 1444
| || || |||||||||||||| | |||| |||| || |||||| ||||||||||||||
Sbjct: 1379 ccgccgaactccacccaaaagtagtcggagcaccagaaaccggtgtcaacaaacaaatgc 1438
Query: 1445 caccagcgagtgttatgacccgtctgatattgatcatggtttggcgaaaactgattagga 1504
|||| || ||||| ||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 1439 caccggctagtgtgatgactcgtctgatattgataatggtttggcgcaaactaattagga 1498
Query: 1505 atcccaacacatactccagtctcattggcctggtctggtctctaatttctttccgatggc 1564
| || ||||||||||||||||| ||||||||||| |||||| ||||| |||| || |||
Sbjct: 1499 acccaaacacatactccagtcttattggcctggtttggtctttaattgcttttcgttggg 1558
Query: 1565 atgtggctatgcctaaaataataaagcagtcaatctccatcctgtctgatgctggtcttg 1624
|||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 1559 atgtggctatgcctgcaataataaagcagtcaatctctatactgtcagatgctggtcttg 1618
Query: 1625 gaatggctatgttcagcttag 1645
|||||||||||||||||||||
Sbjct: 1619 gaatggctatgttcagcttag 1639
>29804.m001502 hypothetical protein
Length = 447
Score = 115 bits (58), Expect = 9e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 458 agtacagaggagctaagatgttgattatggaacaattccctgaaactgctgcttccattg 517
|||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 59 agtacagaggtgctaaaatgttgattatggagcaatttcctgaaactgctgcttccattg 118
Query: 518 tgtcctttaaggtcgattcggatgtcgtttcgttagatggccaagatttcttagaaactg 577
||| ||||| | ||||| ||||| || || |||||||| |||| ||||||||||||
Sbjct: 119 tgttatttaaaatggattctgatgttgtctcattagatggaagagatctcttagaaactg 178
Query: 578 atgcagaaatcggtgatgatgggaaattacatgt 611
|||| |||| ||| |||||||| ||||||||
Sbjct: 179 atgctaaaattggtagcgatgggaagttacatgt 212
>29662.m000472 Auxin efflux carrier component, putative
Length = 1907
Score = 56.0 bits (28), Expect = 7e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1098 taaagaactacacatgtttgtttggagctcaagtgc 1133
||||||||| |||||||| |||||||||||||||||
Sbjct: 1086 taaagaactccacatgttcgtttggagctcaagtgc 1121