Jatropha Genome Database

JcCB0025591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0025591.10 + phase: 0 /partial/short
         (78 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29816.m000677 Auxin efflux carrier component, putative                 78   7e-15

>29816.m000677 Auxin efflux carrier component, putative
          Length = 1941

 Score = 77.8 bits (39), Expect = 7e-15
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                        
Query: 4    gcaaatgcagcgacagaattcccacaagcaattatctttggttgtaacgccataaacaga 63
            ||||||||||| || || |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 1700 gcaaatgcagctactgagttcccacatgcaattatcttcggttgtaacgccataaaaaga 1641

               
Query: 64   cct 66
            |||
Sbjct: 1640 cct 1638