Jatropha Genome Database

JcCB0025091.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0025091.20 + phase: 0 
         (288 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011275 conserved hypothetical protein                          295   7e-80

>30190.m011275 conserved hypothetical protein
          Length = 201

 Score =  295 bits (149), Expect = 7e-80
 Identities = 188/201 (93%)
 Strand = Plus / Plus

                                                                       
Query: 88  atgactcctgctacttatcatcctactcatagccggactcttccaccaccagatcaagtg 147
           ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 1   atgactcctgctacttatcatccaactcatagccggactcttccaccacccgatcaagtg 60

                                                                       
Query: 148 atatctactgaagccaaaaatattcttctgagaaacttctatgagcgagctgaagagagg 207
           ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 61  ataactactgaagccaaaaatatccttctgagaaacttctatgagcgagctgaagagaag 120

                                                                       
Query: 208 ttgagacccaagagagctgcctctgaaagtctaataccagagcatggatgcaagcaacct 267
           |||||| | || |||||||||||||||| ||||||||| ||||||||||||||||| |||
Sbjct: 121 ttgagaacaaaaagagctgcctctgaaaatctaataccggagcatggatgcaagcagcct 180

                                
Query: 268 agggcctccacctcatgctaa 288
           ||||| || ||||||||||||
Sbjct: 181 agggcttctacctcatgctaa 201