Jatropha Genome Database

JcCB0025091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0025091.10 - phase: 0 
         (447 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28653.m000059 pin2-interacting protein x1, putative                   313   5e-85

>28653.m000059 pin2-interacting protein x1, putative
          Length = 1218

 Score =  313 bits (158), Expect = 5e-85
 Identities = 277/316 (87%), Gaps = 3/316 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgcacccgaagcccctgtctgttatgtcggcgtcgcacgtgcatcccctgctttc 60
           ||||||||||| ||||||||| | || ||||| ||||| ||    |||||||||||||| 
Sbjct: 1   atggccgcacctgaagcccctctgtgctatgtaggcgttgctaaagcatcccctgctttt 60

                                                                       
Query: 61  cgcctcatgaaacaaatgggatgggaagaaggagaggggctagggaaagacaagcaaggg 120
           |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 61  cgcctcatgaaacaaatgggatgggaggaaggagaggggctggggaaagacaagcagggg 120

                                                                       
Query: 121 atcaagggatatgttagagtcaagaacaaacaggacactacaggtgttggtgtagagaag 180
           ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 121 atcaaaggatacgttagagtaaaaaacaaacaggacactacaggtgttggtgtagataag 180

                                                                       
Query: 181 ccgagcaattgggcatttgatacaactcaatttgatagcatactcaagagattgaaagtg 240
           || |  |||||||| |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 181 ccaaataattgggcgtttgatactactcaatttgatagtattctcaagagattgaaagtg 240

                                                                       
Query: 241 caagcagcgcatacaactgatgaagttgttgaaa---agaagaacaaagaagaaacaaca 297
           |||||||| ||  ||||||||||||||||||| |   ||||| | || ||||||| ||||
Sbjct: 241 caagcagcacaaccaactgatgaagttgttgagaaggagaaggataatgaagaaaaaaca 300

                           
Query: 298 gagactggtgtatcta 313
            |||||||| ||||||
Sbjct: 301 aagactggtttatcta 316