Jatropha Genome Database
- JcCB0024801.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0024801.10 - phase: 0
(1542 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28333.m000569 serine hydroxymethyltransferase, putative 1937 0.0
29596.m000695 serine hydroxymethyltransferase, putative 862 0.0
>28333.m000569 serine hydroxymethyltransferase, putative
Length = 1548
Score = 1937 bits (977), Expect = 0.0
Identities = 1396/1538 (90%)
Strand = Plus / Plus
Query: 1 atggcaatggcacttcgcaggctctcttcttcctttgacaaacccattcgtcctctcttc 60
||||||||||| ||||| || || ||||||||| ||||||| || |||||||||||||||
Sbjct: 7 atggcaatggcgcttcggagactatcttcttccattgacaagcctattcgtcctctcttc 66
Query: 61 aatgccacttccgtctattacaagtcttcgttgcctaatgaagccgtgtacgagaaggag 120
||||| || || || ||||| |||||| |||||||||||||| |||||||||||||||
Sbjct: 67 aatgctacatctcactgttacatgtcttctttgcctaatgaagctgtgtacgagaaggag 126
Query: 121 aaatctggtgttacatggccaaagcaactaaatgcaccgctggaagccgtggaccctgag 180
|||||||||| || |||||||||||||| |||||||| ||||| | ||||||||||||
Sbjct: 127 aaatctggtgccacttggccaaagcaacttaatgcaccactggaggttgtggaccctgag 186
Query: 181 attgctgacatcattgagcttgagaaagcgcgccaatggaagggacttgaactcatccct 240
||||||||||| |||||||| |||||||| || ||||||||||| |||||||| || ||
Sbjct: 187 attgctgacattattgagctcgagaaagcccgtcaatggaagggtcttgaacttataccc 246
Query: 241 tcagagaacttcacttctgtatcggtgatgcaagctgttggatctgtaatgactaacaaa 300
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 247 tcagagaacttcacttctgtatcagtgatgcaagctgttggatctgtcatgaccaacaag 306
Query: 301 tacagtgaaggatatcccggagcaagatactatggaggaaatgagtatattgacatggct 360
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tacagtgaaggatatcctggtgcaagatactatggaggaaatgagtatattgacatggca 366
Query: 361 gaaaccttgtgtcagaagcgtgcattggaagcatttcgattggatcctgcaaaatgggga 420
||| |||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 367 gaatccttatgtcagaagcgtgcattagaagcatttagattggatcctgctaaatgggga 426
Query: 421 gtgaatgtgcagtctctatctgggtccccagcaaattttcaagtctacactgctttgtta 480
||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 427 gtgaatgtgcagtctctatctggatctccagcaaatttccaagtctacactgcattgtta 486
Query: 481 aaacctcatgatagaatcatggcacttgatcttcctcatggagggcatctttctcatggc 540
||||||||||| ||||||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct: 487 aaacctcatgacagaatcatggcccttgatcttcctcacggtgggcacctttcacatggt 546
Query: 541 tatcagacggacaccnnnnnnntatctgcagtgtcgatattttttgagacaatgccatac 600
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 547 tatcagacggacaccaaaaagatatctgcagtgtcaatattttttgagacaatgccatac 606
Query: 601 agattgaatgaaagcactggctatattgactatgaccagctggagaaaagtgccaccctt 660
||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 607 agattgaatgagagcactggctatattgactatgatcagctggagaaaagtgccgtcctc 666
Query: 661 ttcagaccaaagttaatagttgctggtgctagtgcttatgctcgtctttatgattattca 720
|||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct: 667 ttcagaccaaagttgatagttgctggtgctagcgcttatgctcgtctatatgattatgaa 726
Query: 721 cgcattcgcaaggtttgcgacaaacaaaaagctatattgttagcagatatggcacacatt 780
|| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||
Sbjct: 727 cggattcgcaaggtttgcgacaaacaaaaagctatactgttggcagatatggcacatatt 786
Query: 781 agtgggttggttgcagctggtgtcatcccatcaccttttgagtatgcagatgtagtgacc 840
|| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 787 agcgggttagttgcagctggtgtcatcccatcaccttttgactatgcagatgtagtgacc 846
Query: 841 accacaactcacaagtcacttcgtgggccacgtggagccatgattttctacaggaagggg 900
||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||||||
Sbjct: 847 accaccactcacaagtcccttcgtggacctcgtggagctatgattttctacaggaagggg 906
Query: 901 gtaaaagagattaacaaacaaggccaacaggtgttgtatgactttgaagacaaaatcaat 960
||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||
Sbjct: 907 gtaaaagaggttaacaaacaaggcaaagaggtcttgtatgactatgaagacaaaatcaat 966
Query: 961 caagctgtttttcctggactccaagggggcccgcacaaccacacaattacaggtttagca 1020
||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 967 caatctgtttttcctggacttcaagggggccctcacaaccacacaattactggtttagca 1026
Query: 1021 gttgcactgaaacaggccacaactccagaatataaagcctatcaggagcaagttctcagt 1080
||||| ||||||||||||||||| ||||||| ||||| || || |||||||||||||||
Sbjct: 1027 gttgctctgaaacaggccacaacctcagaatacaaagcttaccaagagcaagttctcagt 1086
Query: 1081 aattgctcaaaatttgccgagactttagtggagaagggatatgatctcgtgtctggtgga 1140
||||| |||||||||| |||| |||| ||||||||||||| ||||||||||| |||
Sbjct: 1087 aattgtgcaaaatttgcacagacgttagctcagaagggatatgaactcgtgtctggcgga 1146
Query: 1141 actgaaaaccatttagttttagtgaatttgaagaacaagggtattgatggatccagagtt 1200
||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1147 actgagaaccatttagttttggtgaatttgaagaacaagggtattgatggctccagagtt 1206
Query: 1201 gaaaaggttctggaagctgttcacattgctgcaaacaaaaataccgttcctggagatgta 1260
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1207 gaaaaggtgctggaagctgttcacattgctgcaaacaaaaacaccgttcctggagatgta 1266
Query: 1261 tctgccatggttcctggtggcataaggatgggaacccctgctcttacgtctaggggattt 1320
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1267 tctgccatggttcctggtggcataaggatgggaacccctgctcttacatctaggggattt 1326
Query: 1321 gttgaggaggattttgctaaagtagcagaattctttgatgctgctgtgaagttggcagtg 1380
|||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1327 attgaggaggactttgctaaggtagcagaattctttgatgctgccgtgaagttggcagtc 1386
Query: 1381 aaaatcaaggctgcaaccaaagggacaaagttgaaggacttcttggctgcacttcctaac 1440
|| ||||||| || |||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 1387 aagatcaagggtgaaaccaaagggacaaagttgaaggacttcttggctacaattcctcag 1446
Query: 1441 ttccaacctgaaattgcaaaattgcgtcatgatgttgaagggtatgccaagcaattccca 1500
|||||| |||| || ||||| | || |||| |||||||| |||||||| |||||||||
Sbjct: 1447 ttccaatctgatatcacaaaacttcgccatgctgttgaagaatatgccaaacaattccca 1506
Query: 1501 actattgggtttgagaaagaaaccatgaagtacaagaa 1538
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 1507 actattggatttgagaaaggaaccatgaagtacaagaa 1544
>29596.m000695 serine hydroxymethyltransferase, putative
Length = 1542
Score = 862 bits (435), Expect = 0.0
Identities = 1040/1244 (83%)
Strand = Plus / Plus
Query: 175 cctgagattgctgacatcattgagcttgagaaagcgcgccaatggaagggacttgaactc 234
||||| |||||||||||||| || ||||||||||| | ||||||||||||||||||||
Sbjct: 169 cctgaaattgctgacatcatcgaacttgagaaagctaggcaatggaagggacttgaactt 228
Query: 235 atcccttcagagaacttcacttctgtatcggtgatgcaagctgttggatctgtaatgact 294
|| || |||||||| ||||| || || || || |||||||| ||||| ||||| ||||||
Sbjct: 229 attccatcagagaatttcacctcagtgtcagttatgcaagcagttggttctgttatgact 288
Query: 295 aacaaatacagtgaaggatatcccggagcaagatactatggaggaaatgagtatattgac 354
|| |||||||| ||||| || || ||||| |||| |||||||| |||||||| ||||||
Sbjct: 289 aataaatacagcgaagggtaccctggagcccgatattatggaggcaatgagtacattgac 348
Query: 355 atggctgaaaccttgtgtcagaagcgtgcattggaagcatttcgattggatcctgcaaaa 414
|||||||| |||||||| ||||||||||| || ||||| |||| |||||||||| |||
Sbjct: 349 atggctgagaccttgtgccagaagcgtgcgttagaagcttttcagttggatcctgaaaag 408
Query: 415 tggggagtgaatgtgcagtctctatctgggtccccagcaaattttcaagtctacactgct 474
|||||||| || |||||||| |||||||| || || || || |||||||| ||||||||
Sbjct: 409 tggggagtcaacgtgcagtcgctatctggatctcctgctaactttcaagtttacactgca 468
Query: 475 ttgttaaaacctcatgatagaatcatggcacttgatcttcctcatggagggcatctttct 534
|| |||||||||||||| ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 469 ttattaaaacctcatgagagaatcatggcgctggatcttcctcatggtggacatctttca 528
Query: 535 catggctatcagacggacaccnnnnnnntatctgcagtgtcgatattttttgagacaatg 594
||||| |||||||| ||||| ||||||| || || ||||||||||||||||||
Sbjct: 529 catggttatcagactgacacaaagaagatatctgcggtttccatattttttgagacaatg 588
Query: 595 ccatacagattgaatgaaagcactggctatattgactatgaccagctggagaaaagtgcc 654
|| ||||||||| |||| | ||||| |||||||| ||||| ||| ||||||||||||||
Sbjct: 589 ccttacagattggatgagaatactggttatattgattatgaacagttggagaaaagtgcc 648
Query: 655 acccttttcagaccaaagttaatagttgctggtgctagtgcttatgctcgtctttatgat 714
|| || || |||||||| | |||||||||||||| ||||||||||| || || |||||
Sbjct: 649 acactctttagaccaaaacttatagttgctggtgcaagtgcttatgcacggctatatgac 708
Query: 715 tattcacgcattcgcaaggtttgcgacaaacaaaaagctatattgttagcagatatggca 774
||| ||||||| ||||||||||| ||||| ||||||||| | |||| || |||||||||
Sbjct: 709 tatgcacgcatccgcaaggtttgtgacaagcaaaaagctgttatgttggctgatatggca 768
Query: 775 cacattagtgggttggttgcagctggtgtcatcccatcaccttttgagtatgcagatgta 834
||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||||| |
Sbjct: 769 cacattagtggcttagttgccgcaggtgttatcccatctccttttgaatatgcagatatt 828
Query: 835 gtgaccaccacaactcacaagtcacttcgtgggccacgtggagccatgattttctacagg 894
||||| |||||||| || || ||||||||||| ||||||||||| ||||| |||| |||
Sbjct: 829 gtgacaaccacaacgcataaatcacttcgtggtccacgtggagctatgatcttctttagg 888
Query: 895 aagggggtaaaagagattaacaaacaaggccaacaggtgttgtatgactttgaagacaaa 954
||||| ||||||||||| |||||| |||| || | ||| |||||||||||||||||||
Sbjct: 889 aagggagtaaaagagatcaacaaaaaaggggaagaagtgaagtatgactttgaagacaaa 948
Query: 955 atcaatcaagctgtttttcctggactccaagggggcccgcacaaccacacaattacaggt 1014
|| ||||| || |||||||||||||| ||||| || || || || ||||| || | |||
Sbjct: 949 attaatcaggcagtttttcctggacttcaaggtggtcctcataatcacacgatatctggt 1008
Query: 1015 ttagcagttgcactgaaacaggccacaactccagaatataaagcctatcaggagcaagtt 1074
||||||||||| || || |||| || ||||| || || || ||||| || |||||||||
Sbjct: 1009 ttagcagttgctctaaagcaggtcatgactcctgagtacaaggcctaccaagagcaagtt 1068
Query: 1075 ctcagtaattgctcaaaatttgccgagactttagtggagaagggatatgatctcgtgtct 1134
|||| || || ||||| ||| | ||| ||| | |||||||| ||||| || ||||||
Sbjct: 1069 ctcaaaaactgttcaaagttttctcagagcttactagagaagggctatgaactggtgtct 1128
Query: 1135 ggtggaactgaaaaccatttagttttagtgaatttgaagaacaagggtattgatggatcc 1194
|||||||| |||||||||||||| || || ||||||| |||||||| |||||||||||
Sbjct: 1129 ggtggaacagaaaaccatttagtcttggtcaatttgagaaacaaggggattgatggatca 1188
Query: 1195 agagttgaaaaggttctggaagctgttcacattgctgcaaacaaaaataccgttcctgga 1254
||||||||||||||| ||||| | ||||| ||||| || ||||||||||| || |||||
Sbjct: 1189 agagttgaaaaggttttggaatcagttcatattgcagctaacaaaaatactgtccctggt 1248
Query: 1255 gatgtatctgccatggttcctggtggcataaggatgggaacccctgctcttacgtctagg 1314
|||||||||||||||||||||||||| || | ||||||||||| ||||| || || |||
Sbjct: 1249 gatgtatctgccatggttcctggtgggattcgcatgggaaccccagctctcacatcaagg 1308
Query: 1315 ggatttgttgaggaggattttgctaaagtagcagaattctttgatgctgctgtgaagttg 1374
|| ||||||||||| |||||||| ||||||||||| ||||||||||| ||||| || |||
Sbjct: 1309 gggtttgttgaggaagattttgcgaaagtagcagagttctttgatgcagctgtaaaattg 1368
Query: 1375 gcagtgaaaatcaaggctgcaaccaaagggacaaagttgaagga 1418
|| |||| |||||||| | || ||||| || |||||||||||
Sbjct: 1369 gccttgaagatcaaggcagatactaaaggaacgaagttgaagga 1412
Score = 67.9 bits (34), Expect = 2e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1463 tgcgtcatgatgttgaagggtatgccaagcaattcccaactattgggtttgagaaagaaa 1522
|||| ||||||||||| | ||||| |||||||||||||| |||| |||||||||||||
Sbjct: 1463 tgcgacatgatgttgaggaatatgcaaagcaattcccaacagttggttttgagaaagaaa 1522
Query: 1523 ccatgaagtacaag 1536
| ||||| ||||||
Sbjct: 1523 caatgaaatacaag 1536