Jatropha Genome Database
- JcCB0023821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0023821.10 - phase: 0 /pseudo/partial
(1128 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29172.m000214 casein kinase II, alpha chain, putative 1096 0.0
29661.m000905 casein kinase II, alpha chain, putative 315 3e-85
>29172.m000214 casein kinase II, alpha chain, putative
Length = 888
Score = 1096 bits (553), Expect = 0.0
Identities = 724/781 (92%)
Strand = Plus / Plus
Query: 344 agatcaagagggaaataaaaatacttcagaatctctgcggtggcccaaatatagtcaaac 403
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 101 agatcaagagggaaataaaaatacttcagaatctctgtggtggcccgaatatagtcaaac 160
Query: 404 ttctcgacattgttagagatcagcactcaaaaactcctagcctgatatttgaatttgtga 463
|||| |||||||||||||||||||| ||||| |||||||| ||||||||||||| ||| |
Sbjct: 161 ttcttgacattgttagagatcagcattcaaagactcctagtctgatatttgaatatgtta 220
Query: 464 acagtacagacttcaaagttttgtacccaacgcttactgattatgacatacgttactaca 523
|||||||||||||||||||| ||||||| || || ||||||||||| ||||| |||||||
Sbjct: 221 acagtacagacttcaaagttctgtaccccacactcactgattatgatatacgctactaca 280
Query: 524 tatacgagcttctcaaggcattagattactgccattcacaaggcataatgcatagagatg 583
|||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 281 tatatgagcttctcaaggcattggattactgccattcacaaggaataatgcatagagatg 340
Query: 584 tcaaacctcacaatgttatgattgatcatgagttgcgaaaacttcgcttgatagattggg 643
|||| |||||||| ||||||||||| ||||||||||| |||||||| || ||||||||||
Sbjct: 341 tcaagcctcacaacgttatgattgaccatgagttgcggaaacttcgtttaatagattggg 400
Query: 644 gtcttgcagaattttaccatcctggcaaggaatataatgttcgggtggcatcaagatact 703
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 401 gtcttgctgaattttaccatcctggcaaggaatataatgttcgtgtggcatcaagatatt 460
Query: 704 ttaagggtcctgagcttctggttgatttgcaagactatgattattctttggatatgtgga 763
||||||| ||||||||||| |||||| | ||||||||||||||||||||||| |||||||
Sbjct: 461 ttaagggccctgagcttctagttgatctacaagactatgattattctttggacatgtgga 520
Query: 764 gccttggttgcatgtttgcaggaatgatctttaggaaggaaccattcttttatggtcatg 823
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 521 gtcttggttgcatgtttgcaggaatgatatttaggaaggaaccattcttttatggtcatg 580
Query: 824 acaaccatgatcagcttgtcaaaattgcaaaggtacttggaactgatgagttgaatgcat 883
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 581 acaatcatgatcagcttgtcaaaattgccaaggtacttggaactgatgagttgaatgcat 640
Query: 884 atctgaataaatatcacttggagcttgatcctcaacttgatgcgcttgttgggaggcaca 943
||||||||||||||||||| ||||||||| |||| |||||||| || || || ||||| |
Sbjct: 641 atctgaataaatatcacttagagcttgatgctcagcttgatgctctagtgggaaggcata 700
Query: 944 gcaggaagccctggtccaaattcattaattcagacaatcagcatctagtttctccagagg 1003
| ||||| ||||||||||| |||| ||||||||| ||||||||| | |||||||||||||
Sbjct: 701 gtaggaaaccctggtccaagttcactaattcagataatcagcatttggtttctccagagg 760
Query: 1004 ctattgattttcttgataagctccttcggtatgatcatcaagacaggctaactgcaagag 1063
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 761 ctattgattttcttgataagctccttcggtatgatcatcaggataggctaactgcaagag 820
Query: 1064 aagcaatggcacatccatatttttctcaggtgagagctgcagaaagtagtagaatgcgga 1123
|||||||||||||||||||||| ||||| || || |||||||||||||| ||||||||||
Sbjct: 821 aagcaatggcacatccatatttctctcaagtaagggctgcagaaagtagcagaatgcgga 880
Query: 1124 c 1124
|
Sbjct: 881 c 881
>29661.m000905 casein kinase II, alpha chain, putative
Length = 1470
Score = 315 bits (159), Expect = 3e-85
Identities = 462/563 (82%)
Strand = Plus / Plus
Query: 328 ccggttaagaaaaagaagatcaagagggaaataaaaatacttcagaatctctgcggtggc 387
||||| ||||| |||||||| |||||||| || |||||||| ||||||||||| || ||
Sbjct: 670 ccggtcaagaagaagaagattaagagggagattaaaatactgcagaatctctgtggaggg 729
Query: 388 ccaaatatagtcaaacttctcgacattgttagagatcagcactcaaaaactcctagcctg 447
|||||||| || || | || || ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 730 ccaaatattgtgaagttgcttgatattgttagagatcagcaatcaaagactccaagcctg 789
Query: 448 atatttgaatttgtgaacagtacagacttcaaagttttgtacccaacgcttactgattat 507
|| ||||||| |||||| | ||| || || ||||| | || ||||| || | || |||
Sbjct: 790 atttttgaatatgtgaataatactgattttaaagtgctttatccaacactctcagactat 849
Query: 508 gacatacgttactacatatacgagcttctcaaggcattagattactgccattcacaaggc 567
|| || || || || || ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 850 gatattcgatattatatctacgaacttctgaaggcattggattactgccactcacaaggt 909
Query: 568 ataatgcatagagatgtcaaacctcacaatgttatgattgatcatgagttgcgaaaactt 627
||||||||| ||||||| || || || || || ||||||||||||||| | | ||||||
Sbjct: 910 ataatgcatcgagatgtgaagccccataacgtcatgattgatcatgagcagaggaaactt 969
Query: 628 cgcttgatagattggggtcttgcagaattttaccatcctggcaaggaatataatgttcgg 687
|| | ||||| ||||| | ||||| ||||| |||||||| || ||||| |||||||||
Sbjct: 970 cggcttatagactggggattagcagagttttatcatcctggaaaagaatacaatgttcgg 1029
Query: 688 gtggcatcaagatactttaagggtcctgagcttctggttgatttgcaagactatgattat 747
|| || |||||||||||||| || ||||| ||||| || |||||||||||||||||||||
Sbjct: 1030 gttgcttcaagatactttaaaggccctgaacttcttgtcgatttgcaagactatgattat 1089
Query: 748 tctttggatatgtggagccttggttgcatgtttgcaggaatgatctttaggaaggaacca 807
|| || || | |||||||||||||| |||||||| |||||||| ||| | ||||| |||
Sbjct: 1090 tcgttagacttatggagccttggttgtatgtttgctggaatgatatttcgcaaggagcca 1149
Query: 808 ttcttttatggtcatgacaaccatgatcagcttgtcaaaattgcaaaggtacttggaact 867
||||| ||||| ||||| || |||| || || |||||||| || ||||||||||||||
Sbjct: 1150 ttcttctatgggcatgataattatgaccaactggtcaaaatagccaaggtacttggaaca 1209
Query: 868 gatgagttgaatgcatatctgaa 890
||||| |||||||| ||| ||||
Sbjct: 1210 gatgaattgaatgcttatttgaa 1232