Jatropha Genome Database
- JcCB0023791.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0023791.20 - phase: 0
(546 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m009079 mads box protein, putative 591 e-168
29790.m000814 mads box protein, putative 74 1e-12
>30174.m009079 mads box protein, putative
Length = 543
Score = 591 bits (298), Expect = e-168
Identities = 483/544 (88%), Gaps = 3/544 (0%)
Strand = Plus / Plus
Query: 1 atggaaaagattcttgaacgctatgagaggtattcttatgcagaaaggcagctcatagca 60
||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 1 atggaaaggattcttgaacgctacgagaggtattcatatgcagaaaggcagcttgtagca 60
Query: 61 aacgatcttaattcacaagagaattggaccctggaatataacagactcaaggcgaaggtt 120
| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 61 actgatcttaactcacaggagaattggaccctggagtataacagactcaaggcaaaggtt 120
Query: 121 gagcttttagagagaaaccataggcactatttaggagaagatttagactcattgagcttg 180
||||||||| | |||||||||||||| ||||| ||||||||| ||||||| |||| | ||
Sbjct: 121 gagcttttacaaagaaaccataggcattatttgggagaagatctagactctttgaccctg 180
Query: 181 aaagagctccaaaacttggagcaacagcttgatactgctcttaagcacatccgagcaaga 240
|||||||| || ||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 181 aaagagctacagaacttggagcaacagcttgatactgctctaaagcacatccggacgaga 240
Query: 241 aacaaccaactgatgcatgaatccatctctgagtatcagaaaaaggagaaggcaatagaa 300
|| |||||||||||| ||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 241 aaaaaccaactgatgtttgagtccatctctgagcttcagaaaaaggagaaggcaatacaa 300
Query: 301 gcgcaaaatagtatgctagcaaagcagattaaggagaaggagaaggcagtggcacagcag 360
| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagcaaaataacatgctatcaaagcagattaaggagaaggagaaggcagtggcacagcag 360
Query: 361 gcactttgggagcagcaaaaccgtaacacccatatgtcacccttccttgtgccacagcaa 420
|||||||||||||||||||||| | || || |||||||||||||| ||||||||| |
Sbjct: 361 gcactttgggagcagcaaaaccatggcaataatgtgtcacccttccttatgccacagcca 420
Query: 421 ccacttccttgtctaaatattggtggcacttaccaggaagaagcagtaccagaagtgagg 480
|||||||| |||||||| ||||||||||||||||||||||| || || ||||||||||
Sbjct: 421 ccacttccatgtctaaacattggtggcacttaccaggaaga---aggacaagaagtgagg 477
Query: 481 agaaatcagctggacctaacattggaaccaatatattcatgtcatcttggatgcttcacc 540
|| || |||| ||||| || ||||||| |||||||||||||| |||||||||||||||
Sbjct: 478 aggaacgagctcgaccttaccctggaacccatatattcatgtcaccttggatgcttcacc 537
Query: 541 acat 544
||||
Sbjct: 538 acat 541
>29790.m000814 mads box protein, putative
Length = 567
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 183 agagctccaaaacttggagcaacagcttgatactgctcttaagcacatccgagcaagaaa 242
|||||||||| |||| ||||||||| |||||||||||||||||| | | ||| |||||||
Sbjct: 183 agagctccaacacttagagcaacagattgatactgctcttaagcgcgtgcgatcaagaaa 242
Query: 243 caaccaact 251
||||||||
Sbjct: 243 gaaccaact 251