Jatropha Genome Database
- JcCB0022491.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0022491.10 - phase: 0 /pseudo
(933 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30068.m002640 Nodulin-26, putative 488 e-137
>30068.m002640 Nodulin-26, putative
Length = 897
Score = 488 bits (246), Expect = e-137
Identities = 423/482 (87%)
Strand = Plus / Plus
Query: 275 aagcttggagcagaatttgtgggaaccttcatcctgatatttgcggcaacagcaggaccc 334
||||||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 217 aagcttggagcagaattcgtgggaacattcatcttgatatttgcagcaacagcaggaccc 276
Query: 335 atagtgaaccaaaagtacagtggagtggagacattgatagggaacgcagcatgttcaggg 394
|| ||||| || ||||||| ||| ||||||||| |||||||||||||||||||| | |||
Sbjct: 277 attgtgaatcagaagtacaatggggtggagacactgatagggaacgcagcatgtgccggg 336
Query: 395 ctagcagtgatgatagtaattctatctaccggacatatatcgggagctcacttgaaccca 454
|||||||||||||| |||||||||| || ||||||||||| ||||||||| ||||||||
Sbjct: 337 ctagcagtgatgattataattctatcaacgggacatatatctggagctcacctgaaccca 396
Query: 455 gccctcaccattgcctttgcagctctccgtcactttccctgggtgcaagtgccggcctac 514
|||| || |||||||||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 397 tccctgactattgcctttgcagccctccgtcactttccctgggtgcaagtccccgcctac 456
Query: 515 atagctgctcaagtatcggcctccatatgtgcttctttcgctctaaaaggagttttccac 574
|||||||| |||||||| |||||||| || || ||||| ||||| || ||||| |||||
Sbjct: 457 atagctgcccaagtatcagcctccatttgcgcatcttttgctctcaagggagtgttccat 516
Query: 575 cctttcatgtctggtggtgttactattccgtccgtcagcactggccaagcttttgctctc 634
||||| ||||| || ||||| ||| |||| || || ||||| ||||||||||| || |||
Sbjct: 517 ccttttatgtccggaggtgtcactgttccatctgtaagcaccggccaagctttcgcgctc 576
Query: 635 gagtttctcatcactttcaatcttttgtttgtcgtcaccgccgtcgccactgatacccgt 694
||||||||||||||||||||||| ||||||| ||||| || || |||||||||||||||
Sbjct: 577 gagtttctcatcactttcaatctcctgtttgttgtcactgctgttgccactgatacccgt 636
Query: 695 gctgtgggagagttggcaggaattgcagttggagcaactgttgcgctaaacattcttgtt 754
||||| |||||| |||| ||||| ||||||||||| |||||| ||| ||||||||||||
Sbjct: 637 gctgtaggagagctggcgggaatagcagttggagctactgttatgctcaacattcttgtt 696
Query: 755 gc 756
||
Sbjct: 697 gc 698
Score = 141 bits (71), Expect = 9e-33
Identities = 182/219 (83%)
Strand = Plus / Plus
Query: 1 atgccggaatccgaggcagggacaccgaccgtgtcagccccggctacgccaggaacgccg 60
|||||||| || ||||| |||||||| || |||||||| ||| ||||||||| ||||||
Sbjct: 1 atgccggagtcggaggcggggacaccaacagtgtcagcgccgaatacgccagggacgccg 60
Query: 61 ggagggccactgttttcgtcgctgagggtggattcactttcctatgatcggaagtcaatg 120
|| |||||||||||||| |||||||| | || || | ||||||||||| ||||| |||
Sbjct: 61 ggggggccactgttttcagcgctgaggatagactcgttgtcctatgatcgcaagtcgatg 120
Query: 121 ccaagatgcaagtgcttgccggttaatgccccatcctggggtcaaactcacacgtgcttc 180
||||||||||||||||| || || ||||| ||| ||| |||| | | |||||||||||
Sbjct: 121 ccaagatgcaagtgctttcccgtaaatgcaccaaccttcggtccaccccacacgtgcttt 180
Query: 181 acggacttccctgcaccagatgtctctcttactcgcaag 219
|| |||||||| ||||| || |||||||||| ||||||
Sbjct: 181 actgacttccccgcacccgacatctctcttacccgcaag 219