Jatropha Genome Database
- JcCB0022161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0022161.10 - phase: 0 /pseudo
(2282 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014233 Structural maintenance of chromosome, putative 1201 0.0
>30147.m014233 Structural maintenance of chromosome, putative
Length = 3531
Score = 1201 bits (606), Expect = 0.0
Identities = 1068/1222 (87%)
Strand = Plus / Plus
Query: 7 atcaaagaaatatgcttagaggggttcaaatcatatgcgacgaggacggtggtccagggt 66
||||| || ||||||||||| || |||||||||||||| || |||||||| ||||||||
Sbjct: 7 atcaaggagatatgcttagaaggattcaaatcatatgcaacaaggacggttatccagggt 66
Query: 67 ttcgatccttttttcaatgcgattacggggctgaatggctcgggcaaatcgaatattctc 126
||||||||||| || ||||| ||||| || | || ||||| ||||||||||| ||||
Sbjct: 67 ttcgatcctttctttaatgccattactggtttaaacggctcaggcaaatcgaacgttctt 126
Query: 127 gattcgatttgctttgtgttaggtattacaaatttgcagcaggttcgtgctgcgaatctc 186
||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 127 gattcgatttgttttgttttaggtattactaatttgcagcaggttcgtgctgccaatctc 186
Query: 187 caggagctggtgtacaagcaagggcaagctggcattactaaggccactgtgtccattgtg 246
|||||| |||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 187 caggagttggtgtacaagcaaggtcaagctggcattactaaagccacagtgtctattgtg 246
Query: 247 ttcgataactctgataggaacaggagtccccttggatatgaggatcattcagagatcacg 306
|||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 247 ttcgccaactctgataggactagaagtccccttggatatgaggatcattcagagattaca 306
Query: 307 gtgacgagacagattgtggtcggtggaaggaacaagtatctgatcaatggaaagcttgcc 366
|| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gttactagacagattgtggttggtggaaggaacaagtatctgatcaatggaaagcttgcg 366
Query: 367 cagcctagtcaagttcagaaccttttccattcagtgcagctgaatgttaacaatccgcat 426
||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| |||
Sbjct: 367 cagcctagtcaagttcaaaaccttttccattcggtgcaattgaatgttaataatccacat 426
Query: 427 tttctcattatgcaaggacgcatcacaaaggtcttaaatatgaagccccctgagatttta 486
||||||||||||||||||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 427 tttctcattatgcaaggacgcataacaaaagttttaaatatgaagccacctgaaattttg 486
Query: 487 tccatgttggaagaggctgctgggactagaatgtatgaaacaaagaaagatgctgcattg 546
|||||| |||||||||||||||| ||||||||||| || || |||||| ||||||| ||
Sbjct: 487 tccatgctggaagaggctgctggaactagaatgtacgagactaagaaatatgctgcgctg 546
Query: 547 aaaacacttgagaagaagcagagtaaggttgatgagattaataagctccttgaccaagaa 606
|||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 547 aaaacacttgagaagaagcaaagtaaggttgatgagatcaataagcttcttgaccaggaa 606
Query: 607 atacttcctgctttggagaagttaaggaaggaaaggatccaatacatgcagtgggcaaat 666
|||||||| ||||| |||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct: 607 atacttccagctttagagaagttgaggaaggaaaggatgcaatatatgcagtgggctaat 666
Query: 667 ggcaatgctgaattagaccgacttaaaagattttgcattgcttatgagtatgttcaagca 726
|| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 667 ggaaatgctgaactagatcgactgaaaagattttgtattgcttatgaatatgttcaagct 726
Query: 727 gaggagattagagaaaacacaattggtgaggttgaacagataaaggccaagatttctgaa 786
||| |||||||||| | | |||||||||| ||||| |||||||| |||||||||||
Sbjct: 727 gagaagattagagacactgctgttggtgaggtggaacaaataaaggcaaagatttctgag 786
Query: 787 attgatggtgacacagaaaagacgcaggtggaaatacaggaaatggagacaaaaatatca 846
||||||| || || |||| || |||||||||||||||||| ||||| ||||| |||||
Sbjct: 787 attgatgatggtacggaaaggatacaggtggaaatacaggaactggagtcaaaagtatca 846
Query: 847 aaattgactgctgaaaaggaagctagtatgggtggggaagtaaaaactttgtcagataaa 906
||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||
Sbjct: 847 caattgactgctgaaaaggaagctagcatgggtggggaggttaagactttgtcagataaa 906
Query: 907 gtacatgttctctctcaagatcttgtgcgcgaagtatccgtgctgcacaacaaggaggac 966
||||||||||||||||||||||| ||||| ||||| |||||| || || ||||||||
Sbjct: 907 gtacatgttctctctcaagatctagtgcgtgaagtttccgtgttgagtaataaggaggat 966
Query: 967 actttaaggggtgaaaatgagaatgccgagaagattgtcgatggtattgaagacttgaaa 1026
|||||| | ||||||| |||||||| | ||||| ||| | ||||||||||||||||
Sbjct: 967 tctttaaagagtgaaaaagagaatgctggaaagatcgtctctagtattgaagacttgaag 1026
Query: 1027 cagtcagtggaagagaaggccactgctgttagaaagtctgaagaaggagcagctgatctc 1086
||||| || ||||||| ||| |||||||| ||| |||||||||||||||||| | |||
Sbjct: 1027 cagtctgtagaagagagggcagctgctgttgtaaattctgaagaaggagcagctcagctc 1086
Query: 1087 gaaaagagagtcaaggaactctctaaggctttggaagaacatgagaaggattaccaaggt 1146
|||||||||| | |||||||| ||| ||| ||||| |||||||||||||||||||||
Sbjct: 1087 aaaaagagagttgatgaactctcaaagagtttagaagagcatgagaaggattaccaaggt 1146
Query: 1147 gtactagctggaaaaagtagtggaaatgaggaaaaatgccttgaagatcaactagctgaa 1206
|| ||||||| || || |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 1147 gtcttagctggtaagagcagtggaaatgaggagaaatgccttgaagatcaactggctgaa 1206
Query: 1207 gcaaaggttgctgttggaaatg 1228
|| | ||||||||||| ||||
Sbjct: 1207 gcgagagttgctgttgggaatg 1228
Score = 1124 bits (567), Expect = 0.0
Identities = 883/987 (89%), Gaps = 1/987 (0%)
Strand = Plus / Plus
Query: 1296 gcatcagttattgtcaaagcgtgaggaagcagttgctgtagaaaatgaatttaatgctag 1355
||||||| || |||||||||| ||||||||| || ||||||| |||||| |||| || |
Sbjct: 1296 gcatcagctaatgtcaaagcgcgaggaagcaatttctgtagagaatgaacttaactctcg 1355
Query: 1356 aagtaaagacgtggaaaatgttaatttggcattggaatctcttccatataaggagggcca 1415
||||||||| |||||||| ||||| ||||||||||| ||||||||||||| |||||| ||
Sbjct: 1356 aagtaaagatgtggaaaacgttaaattggcattggattctcttccatatacggaggggca 1415
Query: 1416 gatggaagctttacaaaaggatcgtgcatctgaaatggattttttgcagaagctgaaaga 1475
|||||||||| | ||||| || ||| ||||||||||||| || |||||||| |||||||
Sbjct: 1416 gatggaagctctgcaaaaagagcgttcatctgaaatggagttggtgcagaagttgaaaga 1475
Query: 1476 caaaatacgggatctttcagcacaattatcaaatgttcaattcacctaccgtgatcctgt 1535
||| || || ||| ||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 1476 caacattcgagatttttcagcacaattatcaaatgttcagttcacgtatcgtgatcctgt 1535
Query: 1536 aaaaaactttgatagatcaaaagtgaaaggcgtggttgcaaaacttatcaaagtgaagga 1595
||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| |||||
Sbjct: 1536 gaaaaattttgatagatcaaaagtaaaaggcgtggtagcgaaacttattaaagtaaagga 1595
Query: 1596 tagctccacaatgactgccttagaggttactgctggtggcaagttatttaatgttgttgt 1655
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1596 tagctccacagcaactgccttagaggttactgctggtggcaagttatttaatgttgtggt 1655
Query: 1656 agacactgaaaatactggaaagcaacttcttcaaaatggtgaactccggagaagagtaac 1715
||||||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1656 agacactgaaaataccggaaagcaacttcttcaaaatggtgatcttcgaagaagagtaac 1715
Query: 1716 aattattcctttgaacaaaattcaatcccatactgttccccatagagttcagcaggctgc 1775
||||||||| ||||| ||||||||| |||||||||| |||| |||||||| ||||||||
Sbjct: 1716 aattattccattgaataaaattcaaccccatactgtacccccaagagttcaacaggctgc 1775
Query: 1776 cattcgattggttggcaaggggaatgcagaattggcactttctttagttggctacgatga 1835
|| | ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1776 cactagattggttggcaaagggaatgcagaactggcactttctttagttggttacgatga 1835
Query: 1836 ggacttaagaaacgctatggaatatgtttttggttcaacctttgtttgcaaaaccatgga 1895
||| ||||||| ||||||||||||||||||||||| || |||||||||||||| || ||
Sbjct: 1836 ggatttaagaagtgctatggaatatgtttttggttcgacatttgtttgcaaaacaattga 1895
Query: 1896 tgctgcaaaggagattgcttttaatcgagaaattcgcactcccagtgtcactgttgatgg 1955
||| || |||||||| ||||||||| ||||||||||||||||||| || ||| |||| ||
Sbjct: 1896 tgcagctaaggagatcgcttttaatagagaaattcgcactcccagcgttactcttgaagg 1955
Query: 1956 tgatatttttcaaccaagtggtcttttgactggtggaagccgcaagggtggtggtgattt 2015
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 1956 agatatatttcaaccaagtggtcttttgactggtgggagccgcaagggtggtggtgatct 2015
Query: 2016 gttaagacaactccatgaattggcaaatgctgaatcagaccttttactacatcaaagaaa 2075
||||| | ||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 2016 cttaaggctactacatgaattggcagaggctgaatcagaccttttactacatcaaagaag 2075
Query: 2076 attatctgaaattgaagctaagattacagagcttctacctcgtcataaaaagttcatgga 2135
|||||||||||||||||| ||||||| |||||||| |||| |||||||||||| ||||
Sbjct: 2076 attatctgaaattgaagcaaagattatggagcttctgcctcttcataaaaagtttgtgga 2135
Query: 2136 acttaagaaacatctggaacttaaacagtatgacctgtcattattccagggccgggctga 2195
||||||||||| || |||||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 2136 ccttaagaaacagctagaacttaaacagtatgacctttcattatttcagggcagggctga 2195
Query: 2196 gcaaaatgaacatcataagcttggtgaattagtgaagaagattgagcaggagctttgaag 2255
||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 2196 gcaaaatgagcatcataagctaggtgaagtagtgaagaagattgagcaggagc-ttgaag 2254
Query: 2256 aagcaaattctatagccaaagaaaagc 2282
|||||||||||| ||||||||| ||||
Sbjct: 2255 aagcaaattctacagccaaagagaagc 2281