Jatropha Genome Database

JcCB0019891.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0019891.10 + phase: 1 /partial
         (1754 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29583.m000186 conserved hypothetical protein                          200   2e-50

>29583.m000186 conserved hypothetical protein
          Length = 513

 Score =  200 bits (101), Expect = 2e-50
 Identities = 318/388 (81%), Gaps = 3/388 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1270 ttttactctgcattggcttgcagaagcaagacttcacttatattgagggacaattgaagt 1329
            |||| |||||||||||||||||| | ||| || |  |||| |||||||||||| ||||||
Sbjct: 23   ttttgctctgcattggcttgcagcatcaaaacgtttcttacattgagggacaaatgaagt 82

                                                                        
Query: 1330 tggaaaggacacagattttgtcactttttatgaaggccatgagaaggttccataaatatc 1389
            ||||||| ||||| || |||||||| ||||| ||||  ||||  | ||||||||||||||
Sbjct: 83   tggaaagaacacaaatcttgtcactctttataaaggttatgaagaagttccataaatatc 142

                                                                        
Query: 1390 tttatggtattgcatctgatgaaatccaatcaaccctaccccaattaaaagagagagtgc 1449
            |||| |||||||| |||  ||| ||   |||||| ||||| | ||| ||||||  |  ||
Sbjct: 143  tttacggtattgcgtctagtgagattttatcaactctacctcgattgaaagaggtaaagc 202

                                                                        
Query: 1450 tggaacctcttaaaatctctgtggaggatgatctaaatgaagcagcgaagcaagttgagg 1509
            |||||||||   | ||  | ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 203  tggaacctcaccacataaccgtggaagatgatctcaatgaagcagcaaagcaagttgagg 262

                                                                        
Query: 1510 atgagatgaaaaccaaaacgga-ggca--ctaaatcctgagcttctccaacagtatgcca 1566
            |||  |||||| |||| | ||| ||||  || |||||||| ||||| |||||||||||||
Sbjct: 263  atggaatgaaagccaagatggaaggcatgctgaatcctgaacttcttcaacagtatgcca 322

                                                                        
Query: 1567 ttgtggacagagacggtgatttcgagaatgcattgaaaagtggtggtggaaaaatatcct 1626
            | | ||||| ||| |||||||| |||||||||||||||| |||||||||||| ||   ||
Sbjct: 323  tagaggacaaagaaggtgatttggagaatgcattgaaaaatggtggtggaaagatgaact 382

                                        
Query: 1627 caagcggtcttattagtgtaaaatctag 1654
            || | ||||| |||||||| ||||||||
Sbjct: 383  caggtggtctcattagtgtgaaatctag 410