Jatropha Genome Database
- JcCB0019791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0019791.10 + phase: 0
(1296 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29780.m001390 nucleic acid binding protein, putative 533 e-151
28952.m000016 nucleic acid binding protein, putative 266 3e-70
29780.m001362 nucleic acid binding protein, putative 74 2e-12
29883.m001956 nucleic acid binding protein, putative 72 9e-12
28694.m000662 nucleic acid binding protein, putative 70 4e-11
30128.m008805 nucleic acid binding protein, putative 52 9e-06
>29780.m001390 nucleic acid binding protein, putative
Length = 1434
Score = 533 bits (269), Expect = e-151
Identities = 504/585 (86%), Gaps = 18/585 (3%)
Strand = Plus / Plus
Query: 96 caacaaaagaaaaagaaaacctgctggtactccagatccagatgcagaggttgtatcttt 155
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 117 caacaaaaggaaaagaaaacctgcaggaactccagatccagatgcagaggttgtatcttt 176
Query: 156 atcaccaaggacattactggaatcagatagatatgtgtgtgagatctgcaaccaagggtt 215
|| |||||||| ||||||||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 177 gtcgccaaggactttactggaatcggatagatacgtatgtgagatctgtaaccaagggtt 236
Query: 216 tcaaagagaccagaatctacaaatgcataggagaagacacaaagtgccatggaaattgtt 275
||||||||||||||| ||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct: 237 tcaaagagaccagaacttacaaatgcatagaagaaggcataaagtaccatggaaattgtt 296
Query: 276 aaagagagagacgcaagaggtaaaaaagagagtttatgtgtgcccagagcctagttgctt 335
|| ||||| || ||||| || || || ||||| ||||| || |||||||| ||||| ||
Sbjct: 297 gaaaagagaaacacaagaagtgaagaaaagagtctatgtttgtccagagccaagttgttt 356
Query: 336 gcaccatgacccttgtcatgctttaggagatcttgttggtataaagaagcattttagaag 395
||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 357 gcaccatgacccttgccatgctttaggagatcttgttggtataaagaaacactttaggag 416
Query: 396 aaaacatagcaatcataagcaatgggtttgtgagaaatgctctaaaggttatgctgttca 455
||||| || ||||| ||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 417 gaaacacagtaatcacaagcagtgggtttgtgagaaatgttctaaaggttatgctgtcca 476
Query: 456 atctgattacaaagctcatctcaagacttgtggcactagaggccattcttgcgactgtgg 515
||||||||||||||| || || ||||||||||||||||| || |||||||| ||||||||
Sbjct: 477 atctgattacaaagcccaccttaagacttgtggcactaggggtcattcttgtgactgtgg 536
Query: 516 ccgggtcttttc---------------cagggttgaaagtttcattgaacatcaagatgc 560
||| |||||||| |||||| || ||||| ||||| || ||||||||
Sbjct: 537 ccgtgtcttttccagcacttggcttttcagggtagagagttttattgagcaccaagatgc 596
Query: 561 ttgtacagtaaggcgaactcagcctg---aactacaagcgctacaacctgcttgctcttc 617
||||||||||||| |||| || |||| |||||||||| |||| || |||||||||||
Sbjct: 597 ttgtacagtaaggagaacccaacctgatcaactacaagcattacagccagcttgctcttc 656
Query: 618 aagaacagcttcaagcaccagcccttcaagtgatgccaattttag 662
|||||| ||||||||||| || |||||||||||||| ||||||||
Sbjct: 657 aagaactgcttcaagcactagtccttcaagtgatgcaaattttag 701
Score = 236 bits (119), Expect = 3e-61
Identities = 263/309 (85%), Gaps = 4/309 (1%)
Strand = Plus / Plus
Query: 988 ttagcaatggcggagaaggcttatgcagaagaagcaagacaacaagcaaagagacaactt 1047
||||| ||||| |||||||| || || || || || |||||||| |||||||||||||||
Sbjct: 1108 ttagctatggctgagaaggcatacgctgaggatgctagacaacaggcaaagagacaactt 1167
Query: 1048 gaaatggctgagcttgaattcgcaaatgcaaaaaggataaggcaacaatctcaagctgaa 1107
|||||||| || || ||||| || ||||| || ||||||||||||||| |||| |||||
Sbjct: 1168 gaaatggcagaactagaatttgctaatgctaagaggataaggcaacaagctcagtctgaa 1227
Query: 1108 cttgagaaggctcaagttttaagagaacaagcaacaaagaaaataagttctactataatg 1167
||||| |||||||||||||||||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 1228 cttgaaaaggctcaagttttaagagaacaagctaccaagaagataagctcgactatgatg 1287
Query: 1168 caaattacttgtcaagcttgcaagcaacattttcaagctccggctgccgcggtggctgcg 1227
||||||||||||||||||||||| ||||| |||||||| | | || |||||| |||
Sbjct: 1288 caaattacttgtcaagcttgcaaacaacaatttcaagcac---cagcaccggtggttgca 1344
Query: 1228 caggcagatgagacgtctcttgctatgagttatatgtcctcagcaacaactgaaggagaa 1287
| ||| |||||||| || ||||| |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 1345 ccggcggatgagacttcacttgccatgagttacatgtcgtcagc-acaactgagggagaa 1403
Query: 1288 ggagagtga 1296
|||||||||
Sbjct: 1404 ggagagtga 1412
Score = 52.0 bits (26), Expect = 9e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 766 caagaacacaatcttgaacttcaact 791
||||||||||||||||||||||||||
Sbjct: 853 caagaacacaatcttgaacttcaact 878
>28952.m000016 nucleic acid binding protein, putative
Length = 1329
Score = 266 bits (134), Expect = 3e-70
Identities = 329/394 (83%)
Strand = Plus / Plus
Query: 170 tactggaatcagatagatatgtgtgtgagatctgcaaccaagggtttcaaagagaccaga 229
|||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 149 tactggaatcggaccgatatgtatgtgagatctgcaaccaagggtttcaaagagatcaaa 208
Query: 230 atctacaaatgcataggagaagacacaaagtgccatggaaattgttaaagagagagacgc 289
| ||||| ||||| ||| | ||||| || || |||||||| || ||||| ||||||| |
Sbjct: 209 acctacagatgcacaggcggagacataaggtcccatggaagttactaaagcgagagactc 268
Query: 290 aagaggtaaaaaagagagtttatgtgtgcccagagcctagttgcttgcaccatgaccctt 349
| ||| | || ||||||| ||||||||| || ||||||||||| |||||||| || |
Sbjct: 269 ctgtggttaggaaaagagtttttgtgtgcccggaacctagttgcttacaccatgatccat 328
Query: 350 gtcatgctttaggagatcttgttggtataaagaagcattttagaagaaaacatagcaatc 409
|||| || | || ||||||||||| || |||||||| |||||||| ||||| || ||||
Sbjct: 329 gtcacgcgcttggtgatcttgttgggattaagaagcactttagaaggaaacacagtaatc 388
Query: 410 ataagcaatgggtttgtgagaaatgctctaaaggttatgctgttcaatctgattacaaag 469
| || |||||||| ||||| ||||||||||||| ||||||||||||||||||||| || |
Sbjct: 389 acaaacaatgggtctgtgaaaaatgctctaaagcttatgctgttcaatctgattataagg 448
Query: 470 ctcatctcaagacttgtggcactagaggccattcttgcgactgtggccgggtcttttcca 529
| |||||||| ||||||||||| ||||||||||| ||||| |||||||| || || || |
Sbjct: 449 cccatctcaaaacttgtggcaccagaggccattcctgcgattgtggccgtgttttctcaa 508
Query: 530 gggttgaaagtttcattgaacatcaagatgcttg 563
| || || ||||| || ||||| |||||||||||
Sbjct: 509 gagtcgagagttttatcgaacaccaagatgcttg 542
Score = 56.0 bits (28), Expect = 5e-07
Identities = 112/140 (80%)
Strand = Plus / Plus
Query: 994 atggcggagaaggcttatgcagaagaagcaagacaacaagcaaagagacaacttgaaatg 1053
||||| ||||| |||||||| ||||| |||||||| | || || ||||| ||||| ||
Sbjct: 1003 atggcagagaaagcttatgctgaagaggcaagacagcgggcgaaaagacagattgaattg 1062
Query: 1054 gctgagcttgaattcgcaaatgcaaaaaggataaggcaacaatctcaagctgaacttgag 1113
|| || | ||||| || ||||| || || |||||||||||| |||||||||| | ||
Sbjct: 1063 gcggaacaagaatttgctaatgccaagagaataaggcaacaagctcaagctgagttcgat 1122
Query: 1114 aaggctcaagttttaagaga 1133
|||||||||| | |||||||
Sbjct: 1123 aaggctcaagctctaagaga 1142
>29780.m001362 nucleic acid binding protein, putative
Length = 1770
Score = 73.8 bits (37), Expect = 2e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 424 tgtgagaaatgctctaaaggttatgctgttcaatctgattacaaagctcatctcaagact 483
||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||
Sbjct: 448 tgtgagaaatgctctaagcgttatgctgttcaatctgattggaaagctcattctaaaact 507
Query: 484 tgtggcact 492
|||||||||
Sbjct: 508 tgtggcact 516
>29883.m001956 nucleic acid binding protein, putative
Length = 1401
Score = 71.9 bits (36), Expect = 9e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 182 atagatatgtgtgtgagatctgcaaccaagggtttcaaagagaccagaatct 233
|||||| ||||||||||||||| ||| |||||||||||||||| ||||||||
Sbjct: 227 atagatttgtgtgtgagatctgtaacaaagggtttcaaagagatcagaatct 278
>28694.m000662 nucleic acid binding protein, putative
Length = 1659
Score = 69.9 bits (35), Expect = 4e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 127 ccagatccagatgcagaggttgtatctttatcaccaaggacattactggaatcagataga 186
||||| ||||||||||| || || || ||||||||| ||| || ||| | || |||||
Sbjct: 199 ccagacccagatgcagaagtgatagctctatcaccaaagactttgatggcaacaaataga 258
Query: 187 tatgtgtgtgagatctgcaaccaagggtttcaaagagaccagaatct 233
| ||| ||||||||||| ||| |||||||||||||||| ||||||||
Sbjct: 259 tttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatct 305
>30128.m008805 nucleic acid binding protein, putative
Length = 1542
Score = 52.0 bits (26), Expect = 9e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 184 agatatgtgtgtgagatctgcaaccaagggtttcaaagagaccagaatct 233
|||| ||| ||||| ||||||||| |||| || |||||||||||||||||
Sbjct: 289 agatttgtatgtgaaatctgcaacaaaggtttccaaagagaccagaatct 338