Jatropha Genome Database
- JcCB0019451.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0019451.10 + phase: 0
(567 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29791.m000547 histone deacetylase 1, 2 ,3, putative 597 e-170
29659.m000144 histone deacetylase 1, 2 ,3, putative 70 2e-11
30147.m013886 histone deacetylase 1, 2 ,3, putative 66 2e-10
>29791.m000547 histone deacetylase 1, 2 ,3, putative
Length = 1290
Score = 597 bits (301), Expect = e-170
Identities = 484/545 (88%)
Strand = Plus / Plus
Query: 1 atgcgatcgaaggacagaattgcctacttttacgacggggatgtgggtggcgtttacttt 60
||||| || ||||||||||| ||||||| || || |||||||||||| |||||||||
Sbjct: 1 atgcgttccaaggacagaatctcctacttctatgatggggatgtgggtaatgtttacttt 60
Query: 61 ggaccgaaccatccaatgaagccgcaccggctttgtatgacccaccatctcgttctctcc 120
|| || || ||||||||||| || ||||||||||||||||| || ||||| |||||||||
Sbjct: 61 gggccaaatcatccaatgaaaccacaccggctttgtatgactcatcatcttgttctctcc 120
Query: 121 tacgagctccacaagaagatggagatttatcggcctcacaaggcatatcctgttgagctt 180
|| || || ||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 121 tatgacctacacaagaagatggagatttatcggcctcataaggcgtatcctgttgagctt 180
Query: 181 gctcagtttcattcagctgattatgttgaatttttacaccggattacaccagatactcaa 240
|||||||| |||||| |||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 181 gctcagttccattcaactgattatgttgaattcttacaccggattgtaccagatactcaa 240
Query: 241 cacttgtttgcaaatgaattggttagatataatcttggagaagattgccctgtctttgag 300
|| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 241 catttgtttgcgaatgaattggctagatataatcttggagaagattgccctgtctttcaa 300
Query: 301 aacctgtttgagttttgtcaaatttatgctggaggaacaatagatgctgcacgtagatta 360
||| |||| || |||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 301 aacttgttcgaattttgtcaaatttatgctggtggaacaatagatgctgcacggagatta 360
Query: 361 aacaatcagctatgtgacattgctataaattgggctggtggattgcatcatgctaagaaa 420
|||||||| ||||||||||| |||||||||||||| |||||||| || |||||||| ||
Sbjct: 361 aacaatcaactatgtgacatcgctataaattgggcaggtggattacaccatgctaaaaag 420
Query: 421 tgtgaggcatctggattttgttacatcaatgacttagtattgggaattttggagcttctt 480
|||| ||||| ||||||||||| |||||||||||||| ||||| ||||| |||||| |
Sbjct: 421 tgtggagcatcaggattttgttatatcaatgacttagttttgggtattttagagcttttg 480
Query: 481 aaatatcatgcccgtgttctatatatcgatatagacgtgcatcatggtgatggtgtggaa 540
|| |||||||| |||||| | || || ||||||||||||||||||||||||||||| |||
Sbjct: 481 aagtatcatgcacgtgttttgtacattgatatagacgtgcatcatggtgatggtgtcgaa 540
Query: 541 gaagc 545
|||||
Sbjct: 541 gaagc 545
>29659.m000144 histone deacetylase 1, 2 ,3, putative
Length = 1368
Score = 69.9 bits (35), Expect = 2e-11
Identities = 134/167 (80%)
Strand = Plus / Plus
Query: 376 gacattgctataaattgggctggtggattgcatcatgctaagaaatgtgaggcatctgga 435
||||||||||| |||||||||||||| | |||||||||||||| ||||| || |||||
Sbjct: 280 gacattgctatcaattgggctggtggcctccatcatgctaagaagtgtgaagcttctggc 339
Query: 436 ttttgttacatcaatgacttagtattgggaattttggagcttcttaaatatcatgcccgt 495
||||| || ||||||| | || ||| || ||||||||||||||| | |||| ||
Sbjct: 340 ttttgctatgtcaatgatattgtcctggctatcttggagcttcttaaacagcatgagcga 399
Query: 496 gttctatatatcgatatagacgtgcatcatggtgatggtgtggaaga 542
||||| ||| | ||||| ||| | || ||||||||||| || |||||
Sbjct: 400 gttctttatgttgatattgacattcaccatggtgatggcgtagaaga 446
>30147.m013886 histone deacetylase 1, 2 ,3, putative
Length = 1407
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 379 attgctataaattgggctggtggattgcatcatgctaagaaatgtgaggcatctggattt 438
|||||| | |||||||||||||| || ||||||||||||||| |||| || ||||| |||
Sbjct: 430 attgctttgaattgggctggtgggttacatcatgctaagaaaagtgaagcttctgggttt 489
Query: 439 tgtta 443
|||||
Sbjct: 490 tgtta 494