Jatropha Genome Database

JcCB0018541.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0018541.30 + phase: 0 /short
         (141 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28355.m000100 hypothetical protein                                    101   1e-21

>28355.m000100 hypothetical protein
          Length = 2751

 Score =  101 bits (51), Expect = 1e-21
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   cggattccacgaaagtgagactggtgcggtgcccaaagtgtgaaaatcttcttccggagc 64
           ||||||| || ||||| ||||||||  |||| |||||||| ||||| |||||||| || |
Sbjct: 5   cggattctaccaaagtaagactggttaggtgtccaaagtgcgaaaaccttcttcctgaac 64

                                                              
Query: 65  tggcggattactctgtttatcagtgtggcggctgcggtgccgttcttcgag 115
           | || ||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 65  ttgccgattactctgtttatcagtgtggaggttgtggtgccgttcttcgag 115