Jatropha Genome Database

JcCB0018541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0018541.10 + phase: 1 /partial
         (536 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28355.m000098 Indole-3-acetic acid-amido synthetase GH3.5, putative   246   1e-64

>28355.m000098 Indole-3-acetic acid-amido synthetase GH3.5, putative
          Length = 1671

 Score =  246 bits (124), Expect = 1e-64
 Identities = 412/508 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtttgtacaggtatagactaggagatgttgtgaaaatcgtgggcttccataactcaaccc 60
            |||| |||||||| ||||||||||||||||||||  |  |||||||||||||||| ||||
Sbjct: 1133 gtttttacaggtacagactaggagatgttgtgaaggttatgggcttccataactcgaccc 1192

                                                                        
Query: 61   cagaactaaaattcgtatgcaggacaagcttactgcttacaataaacattgataagaaca 120
            ||||||| ||||| |||||||| |  ||| ||||||| |  ||||||||||| |||||||
Sbjct: 1193 cagaacttaaatttgtatgcagaaggagcctactgctcagcataaacattgacaagaaca 1252

                                                                        
Query: 121  gtgagaaagacttacacttagcagtagatgaagcagcaaagctattagctgaagagaaaa 180
             ||| ||||| ||||| || |  ||||| |||||||| ||| | ||||| || |||||| 
Sbjct: 1253 ctgaaaaagatttacagttggttgtagaagaagcagctaagttgttagcggacgagaaac 1312

                                                                        
Query: 181  ttgaagttgtcgattttagtagcctagtggatctatcaacagagcctgggcattacgtga 240
            ||||||| || ||||| || || |||| |||||  || || || ||||| || || || |
Sbjct: 1313 ttgaagtcgttgatttcagcagtctagcggatcgttccactgaccctggccactatgtta 1372

                                                                        
Query: 241  tcttctgggaaattaataaagaaccaactgatgagatcttgaaagagtgttgcaattgct 300
            |||| |||||||||| |   |||||||| |  ||| ||||| ||||||| ||||||||| 
Sbjct: 1373 tcttttgggaaattagtggggaaccaacagcggaggtcttgcaagagtgctgcaattgcc 1432

                                                                        
Query: 301  tggatcgatctttccttgatgcaggttacgttagttctcgcaagatcaatgctattggac 360
            |||| |||||||| ||||||||||| || ||||  || |||||| | || || |||||||
Sbjct: 1433 tggaccgatcttttcttgatgcaggatatgttacctcgcgcaaggttaaagcgattggac 1492

                                                                        
Query: 361  cccttgagcttcgagtagttcgcagaggaactttccagaaaattctagatcattatctgg 420
            | || ||||||||||| ||||  ||||||||||||||||| ||||| ||||||||| |||
Sbjct: 1493 ctctcgagcttcgagttgttcatagaggaactttccagaagattctggatcattatttgg 1552

                                                                        
Query: 421  gtttaggaactgttgttagccagttcaaaaccccgcgatgcgtcgctcccacgaacaacg 480
            | |||||| ||| |||||| || || ||||| ||  ||||||||| |||| | ||||| |
Sbjct: 1553 gattaggagctgctgttagtcaatttaaaactcccagatgcgtcggtcccgcaaacaatg 1612

                                        
Query: 481  tagtgttgcaaatcctaaacaataatgt 508
            | || | ||||||| | | |||||||||
Sbjct: 1613 tggtatcgcaaatcttgagcaataatgt 1640