Jatropha Genome Database

JcCB0018351.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0018351.30 - phase: 2 /partial
         (247 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009166 WRKY transcription factor, putative                     131   2e-30
29635.m000468 WRKY transcription factor, putative                      62   2e-09

>30174.m009166 WRKY transcription factor, putative
          Length = 1407

 Score =  131 bits (66), Expect = 2e-30
 Identities = 100/110 (90%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggctgcaaagtccgtaaacatgtcgaaagagtctgcaacagacccaaaagcagttataac 63
            ||||||||||||||||||||||| || |||| |||||||||| |||| ||||||| ||||
Sbjct: 1153 ggctgcaaagtccgtaaacatgttgagagag-ctgcaacagatccaagagcagttgtaac 1211

                                                              
Query: 64   aacatatgaaggcaaacataatcatgatttaccagcagctaaagggagca 113
            |||||||||||| ||||||||||||||| ||||||| || ||||||||||
Sbjct: 1212 aacatatgaaggaaaacataatcatgatgtaccagcggcaaaagggagca 1261


>29635.m000468 WRKY transcription factor, putative
          Length = 1533

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    ctggctgcaaagtccgtaaacatgtcgaaagagtctgcaacagacccaaaagcagttata 61
            |||| ||||| |||||||| ||||| || |||| ||||| ||||||| ||||| ||  ||
Sbjct: 1286 ctgggtgcaatgtccgtaagcatgttgagagag-ctgcagcagaccctaaagctgtggta 1344

                                                       
Query: 62   acaacatatgaaggcaaacataatcatgatttaccagcagcta 104
            || |||||||| || ||||||||||||||| | || |||||||
Sbjct: 1345 accacatatgagggaaaacataatcatgatgttcctgcagcta 1387