Jatropha Genome Database

JcCB0018351.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0018351.20 + phase: 0 /partial/short
         (147 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009167 conserved hypothetical protein                          168   5e-42
29635.m000466 conserved hypothetical protein                           50   3e-06

>30174.m009167 conserved hypothetical protein
          Length = 1542

 Score =  168 bits (85), Expect = 5e-42
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                        
Query: 4    catggaatagctaatgtgggcttaaccattcaggcacaaaaaccagaagaactaccagag 63
            ||||| ||||||||||||||||||||||||||||||||||||||||| || || || || 
Sbjct: 1399 catgggatagctaatgtgggcttaaccattcaggcacaaaaaccagaggagctgccggaa 1458

                                                                        
Query: 64   caagtgctatgctgcgttcgcttaaataagatcgattttgtaaatcacggccaaataccc 123
            |||||| | |||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1459 caagtgttgtgctgcgtgcgcttgaataagattgattttgtaaatcatggccaaataccc 1518

                         
Query: 124  accattgtaacta 136
            |||||||||||||
Sbjct: 1519 accattgtaacta 1531


>29635.m000466 conserved hypothetical protein
          Length = 1638

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 25   ttaaccattcaggcacaaaaaccagaagaactaccagagcaagtgctatgctg 77
            ||||| || |||||||||||||  |||||||| ||||||||||| || |||||
Sbjct: 1513 ttaactatccaggcacaaaaacaggaagaacttccagagcaagtcctgtgctg 1565