Jatropha Genome Database
- JcCB0017431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0017431.10 - phase: 0
(1623 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m009128 ATP binding protein, putative 339 3e-92
30221.m002214 hypothetical protein 176 3e-43
30221.m002215 DNA binding protein, putative 170 2e-41
>30174.m009128 ATP binding protein, putative
Length = 1584
Score = 339 bits (171), Expect = 3e-92
Identities = 453/547 (82%)
Strand = Plus / Plus
Query: 546 tgacaatgaagagaggatgatgggcacctgtattatgccaatgccggatgcagaatcatc 605
|||||||||||||| | | ||||||| |||||||| || ||||| || ||||| ||||
Sbjct: 540 tgacaatgaagagaagtttttgggcacttgtattattcccatgccagacacagaaacatc 599
Query: 606 tgaaaataagaataatgaggctggcaatggcagaacagattgttgttgcctagatgaagg 665
|| | |||| | | ||||| ||| |||||||| |||||| ||||| | ||||||||
Sbjct: 600 tgcagataatagtgatgagattggaggtggcagaaaagattgcagttgcatggatgaagg 659
Query: 666 ctctgttagatgtgtaagacagcatgtaatggaagctagggaaaaactcaaaaattccct 725
||||| ||||||||| |||||| ||||||||||| |||||| ||| ||| | |||
Sbjct: 660 ctctggtagatgtgtgcaacagcacataatggaagctcgggaaagtctcttaaaattcct 719
Query: 726 tgggtatgaaaaatttgagcatttgggattttatgacatgggagaggaggtgacacgtaa 785
|||| ||||| | || | ||||||||||||| ||| ||||||||||||||||||| |||
Sbjct: 720 tgggcatgaacagttagttcatttgggattttgtgagatgggagaggaggtgacacataa 779
Query: 786 atggagcgaggaagatcaacgggcatttcatgctgttgtatattccaatcctgcatcctt 845
||||| | ||||||| |||| | |||||||| ||||| |||||||||||||||| ||
Sbjct: 780 atggaccaaggaagaggaacgtgtgtttcatgcagttgtgaattccaatcctgcatcatt 839
Query: 846 tggccagaatttttggaagcaattgtcacaagtttttgctactcgatccacgaaggaaat 905
|||||||||||||||||||| ||||||| || ||| |||||||||| || | ||||||
Sbjct: 840 gggccagaatttttggaagcacctgtcacacgtgttttctactcgatctaccatggaaat 899
Query: 906 tgtcagctattacttcaatgtcttcatgcttcggaggagggctgctcagaacagatccaa 965
||||||||||||||||||||| || ||||| ||||| |||||| |||||||||||| ||
Sbjct: 900 tgtcagctattacttcaatgtatttatgctacggagacgggctgttcagaacagatctaa 959
Query: 966 cttgctggacattgacagtgatgatgatgagttgcatggaatcaataggggatcatataa 1025
||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct: 960 ctttttggacattgacagtgatgatgatgaattgcatggaatcaataggggatcttttaa 1019
Query: 1026 agttcaagtttcagaagaagatgatgactctgatattgactctgttgatcagaacgatca 1085
|| || || ||| ||||||||||||||||| || || ||| ||||||| | |||||
Sbjct: 1020 agctcgtgtactagatgaagatgatgactctgacatcgagtcttttgatcaatatgatca 1079
Query: 1086 tgcagat 1092
|||||||
Sbjct: 1080 tgcagat 1086
Score = 129 bits (65), Expect = 6e-29
Identities = 145/172 (84%), Gaps = 6/172 (3%)
Strand = Plus / Plus
Query: 1440 atgcttgcctggtaatggggatgaatacagtgatgcggtggatcatgatcatgtgtactt 1499
|||||| ||||||||||| |||| ||||||||||| |||||||| | |||||||
Sbjct: 1401 atgcttccctggtaatggagatggatacagtgatggagtggatcagg------tgtactt 1454
Query: 1500 actggatccttgtgatgctaaagcttgggatgcccgatatacagttccaataaaaggtgt 1559
||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| ||
Sbjct: 1455 gttggattcttgtgatgctaaagcttgggatagccgatacacagttccaataaaaggcgt 1514
Query: 1560 tgagcttctacccacatgcaacatgattgaagaaatttttggacaaggaaca 1611
||| ||||||| || || ||||| |||||||| ||||||||||| ||||||
Sbjct: 1515 tgattttctaccaacttgtaacattattgaagagatttttggacatggaaca 1566
Score = 117 bits (59), Expect = 2e-25
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 1 atgggattcaaacggccttttgatagtgatgagttccaggagcttccttttaagcaggct 60
|||||||| ||||| ||||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 1 atgggatttaaacgaccttttgattgtgaggacttccaggagcttccttttaagcaggct 60
Query: 61 agacagttggacttcggcaataacttgactcagtttgcacatttgtataaaactacatc 119
|||||| |||||| |||| || |||||||||||||| |||| |||| |||||||||
Sbjct: 61 agacaggtggactatagcaacaagatgactcagtttgcagatttatatagaactacatc 119
Score = 101 bits (51), Expect = 1e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 333 tgaatttgattttcctcggagatttgttccttttgaggatgcctactgttcatacttgga 392
|||||||||| |||| |||||||| | ||| ||| ||||| |||| |||||| |||||
Sbjct: 327 tgaatttgatgttccccggagattagaagcttctgatgatgcttacttttcatatttgga 386
Query: 393 ccgttctcctagaagacaagttcctcttggaccaaatcatcaagctagcattcca 447
||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 387 ttcttctcctagaaaacaagttcctcttggaccaaatcatcaagcgagcattcca 441
>30221.m002214 hypothetical protein
Length = 408
Score = 176 bits (89), Expect = 3e-43
Identities = 155/177 (87%)
Strand = Plus / Plus
Query: 900 ggaaattgtcagctattacttcaatgtcttcatgcttcggaggagggctgctcagaacag 959
||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||||
Sbjct: 3 ggaaattgtcagctattacttcaatgtatttatgctacggagacgggctgttcagaacag 62
Query: 960 atccaacttgctggacattgacagtgatgatgatgagttgcatggaatcaataggggatc 1019
||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 63 atctaactttttggacattgacagtgatgatgatgaattgcatggaatcaataggggatc 122
Query: 1020 atataaagttcaagtttcagaagaagatgatgactctgatattgactctgttgatca 1076
| ||||| || || | ||| ||||||||||||||||| || || ||| |||||||
Sbjct: 123 ttttaaagctcgtgtattagatgaagatgatgactctgacatcgagtcttttgatca 179
Score = 81.8 bits (41), Expect = 1e-14
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1307 gagaggatttcactgttcaagatgattcatgcatgtcgtttgagttccaagct 1359
|||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 346 gagaggatttcactgtccaagatgactcatgcatgtcttttgagttccaagct 398
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1181 gagatgccacaggtgaagattctgggatagattatgtctcagaaacacctg 1231
|||| ||||| || |||||||||||| ||||| |||| |||||||||||||
Sbjct: 281 gagaggccactggagaagattctggggtagataatgtttcagaaacacctg 331
>30221.m002215 DNA binding protein, putative
Length = 732
Score = 170 bits (86), Expect = 2e-41
Identities = 257/314 (81%)
Strand = Plus / Plus
Query: 546 tgacaatgaagagaggatgatgggcacctgtattatgccaatgccggatgcagaatcatc 605
|||||||||||||| | | ||||||| |||||||| || ||||| || ||||| ||||
Sbjct: 417 tgacaatgaagagaagtttttgggcacttgtattattcccatgccagacacagaaacatc 476
Query: 606 tgaaaataagaataatgaggctggcaatggcagaacagattgttgttgcctagatgaagg 665
|| | |||| | | ||||| ||| |||||||| ||||||| ||||| | ||||||||
Sbjct: 477 tgcagataatagtgatgagattggaggtggcagaaaagattgtagttgcatggatgaagg 536
Query: 666 ctctgttagatgtgtaagacagcatgtaatggaagctagggaaaaactcaaaaattccct 725
||||||||||||||| ||||||| ||||||||||| |||||| ||| ||| | |||
Sbjct: 537 ctctgttagatgtgtgcgacagcacataatggaagctcgggaaagtctcttaaaattcct 596
Query: 726 tgggtatgaaaaatttgagcatttgggattttatgacatgggagaggaggtgacacgtaa 785
| || ||||| |||| | ||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 597 taggcatgaacaattagttcatttgggattttatgagatgggagaggaggtgacacataa 656
Query: 786 atggagcgaggaagatcaacgggcatttcatgctgttgtatattccaatcctgcatcctt 845
||||| | ||||| | |||| | |||||||| ||||| |||||||||||||||| ||
Sbjct: 657 atggaccaaggaaaaggaacgtgtgtttcatgcagttgtgaattccaatcctgcatcatt 716
Query: 846 tggccagaattttt 859
|||||||||||||
Sbjct: 717 gggccagaattttt 730
Score = 101 bits (51), Expect = 1e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 333 tgaatttgattttcctcggagatttgttccttttgaggatgcctactgttcatacttgga 392
|||||||||| |||| |||||||| | ||| ||| ||||| |||| |||||| |||||
Sbjct: 204 tgaatttgatgttccccggagattagaagcttctgacgatgcttacttttcatatttgga 263
Query: 393 ccgttctcctagaagacaagttcctcttggaccaaatcatcaagctagcattcca 447
||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 ttcttctcctagaaaacaagttcctcttggaccaaatcatcaagcgagcattcca 318