Jatropha Genome Database

JcCB0016381.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0016381.30 + phase: 0 
         (285 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004599 sucrose phosphate syntase, putative                     232   9e-61
28543.m000384 sucrose phosphate syntase, putative                      74   5e-13

>29848.m004599 sucrose phosphate syntase, putative
          Length = 3075

 Score =  232 bits (117), Expect = 9e-61
 Identities = 234/273 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgggaaatgactggataaacagttacctggatgcaatactcgacgttgatccggga 60
           ||||||||||| |||||||||||||||||||| || || || || ||||||||||| |||
Sbjct: 1   atggcgggaaacgactggataaacagttacctagaagcgatcctagacgttgatcctgga 60

                                                                       
Query: 61  attgacaatgcaaaattgtcgctgttgcttagggagagaggtcgtttcagtcccactcgc 120
           || ||| | ||||||| |||| ||||  | ||||||||||| ||||| ||||| ||||| 
Sbjct: 61  atcgacgaggcaaaatcgtcgttgttattgagggagagaggccgttttagtcctactcgt 120

                                                                       
Query: 121 tacttcgtcgaagaggttattactggctttgacgagactgatctccatcgttcctggctt 180
           ||||| || ||||||||||||||||| ||||| |||||||| || || ||||| ||| ||
Sbjct: 121 tactttgttgaagaggttattactggttttgatgagactgaccttcaccgttcatggatt 180

                                                                       
Query: 181 cgagctgcagctatgagaagcacgcaagagaggaataccagattagagaacatgtgttgg 240
           |||||||| |||||||| ||||| || ||||||||||| || || || || |||||||||
Sbjct: 181 cgagctgccgctatgaggagcacacaggagaggaatacaaggttggaaaatatgtgttgg 240

                                            
Query: 241 aggatttggaacttggctcggaagaagaaacag 273
           ||||||||||| |||||||| ||||||||||||
Sbjct: 241 aggatttggaatttggctcgcaagaagaaacag 273


>28543.m000384 sucrose phosphate syntase, putative
          Length = 2997

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 208 gagaggaataccagattagagaacatgtgttggaggatttggaacttggctcg 260
           ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 208 gagaggaatacaagattggagaatatgtgttggaggatttggaacttagctcg 260