Jatropha Genome Database
- JcCB0016381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0016381.10 - phase: 0
(1161 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004595 conserved hypothetical protein 309 2e-83
>29848.m004595 conserved hypothetical protein
Length = 1197
Score = 309 bits (156), Expect = 2e-83
Identities = 402/484 (83%)
Strand = Plus / Plus
Query: 415 agggtattgaagggatttgagaagcgtttatcgcagggttttgatggtgattttcaagaa 474
||||||||||| | |||||||| ||||||| | |||||||||| || |||||||||||
Sbjct: 421 agggtattgaaagagtttgagaatcgtttattactgggttttgatagtaattttcaagaa 480
Query: 475 ttggttcttagagctaaaggattttcgcttcttgaatcgttaatatgtgactcaactcgg 534
|| ||| | ||||| ||||| || | |||||||||| ||| |||||||||||||| |
Sbjct: 481 ttagttttgagagcaaaagggttcacaattcttgaatctttactatgtgactcaacttgc 540
Query: 535 ccgatgaaaattcgagaacaggccgctctttgtgtagttggtttagttagatttaacagg 594
||| || ||| |||||||||| ||||||||| ||||||||||||| ||| || ||
Sbjct: 541 tcgaagaggattagagaacaggctgctctttgtatagttggtttagtcgaattcaataga 600
Query: 595 gatgtgtttgtgggtttggttctaatgggtccgatagttcaatctttagtatcaacggct 654
||||||||||| || |||||| |||||||||| || ||||||||||| |||||| ||||
Sbjct: 601 gatgtgtttgttgggttggttttaatgggtccaattgttcaatctttgatatcaatggct 660
Query: 655 tctgattggtcaatacaagttctctgctcacttattagattgatcagaactccattaatc 714
|| | ||| || ||||||||||| || |||||||| |||||||||| |||||||| ||
Sbjct: 661 tcaggttgttccatacaagttctttgttcacttataagattgatcaagactccattgatt 720
Query: 715 gatgaaattgagttagagggagaaattccaagaattattagcttatttagctctcaagat 774
||||||||||| || || |||||||| ||||||||||| ||| | || || || ||||||
Sbjct: 721 gatgaaattgaattggatggagaaatcccaagaattataagccttttgaggtcacaagat 780
Query: 775 ttatcaattcaagttgcggccatggattgcgtttacgaaattgcttattttgggagaaaa 834
|||||||||||||| || || ||||||||| | | |||||||| |||| ||| ||||||
Sbjct: 781 ttatcaattcaagtagcagcaatggattgcatctgtgaaattgcatattctggtagaaaa 840
Query: 835 gaagtgattgaagctatgatagaacaaggattgattgagaaattaatggaattgcagaga 894
|||||||||||||||||||||||| |||| |||||||| || | |||||||| || |||
Sbjct: 841 gaagtgattgaagctatgatagaagaagggttgattgaaaagctgatggaattccaaaga 900
Query: 895 tcaa 898
||||
Sbjct: 901 tcaa 904
Score = 97.6 bits (49), Expect = 1e-19
Identities = 156/189 (82%), Gaps = 2/189 (1%)
Strand = Plus / Plus
Query: 966 agaaattgtaaagaaacggccatttgcgagctgtgttgcgaggtttgctttgcaagtaga 1025
||||||||||| ||| | |||||||| |||||||| || ||||| ||||||| ||
Sbjct: 1002 agaaattgtaaggaacagaccatttgcaagctgtgtaaagacatttgcagtgcaagttga 1061
Query: 1026 agtaggagagggattggaacgaa-aagaaagaaaagagttaaaaagggagatattgagaa 1084
||||||||| |||||| ||| | |||||||||||| || |||| ||| |||||||| |
Sbjct: 1062 agtaggagatggattg-aactaccaagaaagaaaagccttgaaaatggaaatattgagga 1120
Query: 1085 gagttagagaggcctctgtttctgaagcagaggctgcctctgtcgttgcagaggtactat 1144
|||||| ||| |||||||||||||| ||||||| |||||| | || ||||||||||| |
Sbjct: 1121 gagttaaagaagcctctgtttctgaggcagaggaggcctctattgtggcagaggtactgt 1180
Query: 1145 ggggttctt 1153
|||||||||
Sbjct: 1181 ggggttctt 1189