Jatropha Genome Database
- JcCB0016371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0016371.10 - phase: 0 /partial
(2322 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29767.m000207 Mitochondrial respiratory chain complexes assembly... 569 e-161
29993.m001041 Cell division protein ftsH, putative 90 7e-17
28650.m000181 conserved hypothetical protein 78 3e-13
>29767.m000207 Mitochondrial respiratory chain complexes assembly
protein AFG3, putative
Length = 2502
Score = 569 bits (287), Expect = e-161
Identities = 1024/1272 (80%)
Strand = Plus / Plus
Query: 888 ccgtggaatattcaacatagggaaggctcatgtgaccaaagtggataaaaatgctaagaa 947
|||||||||||| ||||| || ||||| || || || ||| | ||||| || ||||| |
Sbjct: 963 ccgtggaatatttaacatgggaaaggcgcacgtcacaaaattagataagaacgctaaaga 1022
Query: 948 taaggtatatttcaaagatgttgctggctgtgatgaggcgaagcaggaaatcatggagtt 1007
|||| ||| || ||||||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 1023 taagatattctttaaagatgttgctggctgtgatgaagcaaaacaagaaattatggagtt 1082
Query: 1008 tgtacacttcctcaagaacccaaagaagtatgaggaactgggagctaaaattccgaaagg 1067
||| |||||||||||||| |||||||| || |||||| ||||||| |||||||| |||||
Sbjct: 1083 tgtgcacttcctcaagaatccaaagaaatacgaggaattgggagcaaaaattccaaaagg 1142
Query: 1068 tgctcttttggttggtcctccaggaactggaaagacccttctagcaaaggcaactgcagg 1127
||| ||| |||| || ||||| || || || ||||| ||||| |||||||||||||| ||
Sbjct: 1143 tgcccttctggtaggacctcctggcacagggaagacacttcttgcaaaggcaactgctgg 1202
Query: 1128 ggaatctggagtgccttttctgtccatttctggttcagatttcatggagatgtttgttgg 1187
|||||||| ||||| || || || || ||||| |||||||||||||| |||||||||||
Sbjct: 1203 tgaatctggtgtgcccttcctatcaatatctgggtcagatttcatggaaatgtttgttgg 1262
Query: 1188 tgttggaccgtccagagtgagaaacttgtttcaacaagctaggcagtgtgctcctagtat 1247
|| || || ||||| ||||||| ||| ||||| |||| || || ||||| ||||||||
Sbjct: 1263 agtcgggccatccagggtgagaagcttatttcaggaagcaagacaatgtgcacctagtat 1322
Query: 1248 tgtatttattgatgagattgatgcgattggcagagcgagggggcgtgggggcttctcagg 1307
||| || |||||||| || ||||| ||||| |||| ||||||||||| || || || ||
Sbjct: 1323 tgtgttcattgatgaaatagatgccattggtcgagcaagggggcgtggaggattttcggg 1382
Query: 1308 tggcaatgatgagcgagaaagtactcttaatcagttactggtcgaaatggatggctttgg 1367
||||||||||||||| ||||| || ||||| ||||| || || ||||||||||| |||||
Sbjct: 1383 tggcaatgatgagcgtgaaagcacccttaaccagttgcttgtagaaatggatggatttgg 1442
Query: 1368 aactacttctggagttgttgtgcttgctggcactaataggccagacattttagacaaagc 1427
|| || |||||||| ||||| ||||||||||| |||||||| || || |||||||||||
Sbjct: 1443 gaccacctctggagtagttgtacttgctggcacaaataggcctgatatcttagacaaagc 1502
Query: 1428 tttgttgagaccaggccgatttgatcgtcaaatatccattgataagccagatattaaagg 1487
| | ||| |||| || || |||||||||||||| | ||||| || || || || |||||
Sbjct: 1503 tctattgcgacctggtcggtttgatcgtcaaattacaattgacaaacctgacatcaaagg 1562
Query: 1488 ccgtgaacagatatttaatatctacctgnnnnnnntaaaacttgatcatgagccatcata 1547
|||||| ||||| || | || || || ||||||||||| |||| || | ||
Sbjct: 1563 ccgtgaccagattttccagatatatcttaaaaagctaaaacttgataatgatcctcctta 1622
Query: 1548 ttattcgcaaaggctcgcagccctcactcctggatttgctggggcagatattgcaaatgt 1607
||| || || | || || || | ||||||||||||||||| || || |||||||||||
Sbjct: 1623 ttactctcagcgacttgctgctttgactcctggatttgctggagctgacattgcaaatgt 1682
Query: 1608 ttgtaatgaagctgcactagtagctgctaggtgtgaaggttcacaggtgacaatggacaa 1667
||| ||||| ||||| || | ||||| ||| ||| || | || ||||||||| | |
Sbjct: 1683 ttgcaatgaggctgctttaattgctgcaaggaatgagagtgcgcaagtgacaatgcaaca 1742
Query: 1668 ttttgaggcagcaatagatagaataattggtggtttggagaagaagaacaaggtaataag 1727
||||| ||||||| || || |||||||||| ||||| |||||||| ||||| || ||
Sbjct: 1743 ctttgaatcagcaatcgacagggtaattggtggcttggaaaagaagaataaggtgattag 1802
Query: 1728 caagcaggagcgccgaactgttgcttatcatgaatcaggtcatgctgttactggctggtt 1787
||||| || | || ||||| ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1803 caagcttgaaaggcggactgtcgcttaccatgaatctggtcatgctgttactggttggtt 1862
Query: 1788 cttggaacacgcagaacctcttctaaaagtgacaattgttccgcgtggtactgctgccct 1847
|||||||| |||||||| | || || || ||||||||||| ||||||||||| || ||
Sbjct: 1863 tttggaacatgcagaacccttacttaaggtaacaattgttccacgtggtactgcagctct 1922
Query: 1848 tggatttgcacagtatgttcctaatgaaaaccttctcttgactaaggagcagctttttga 1907
|| ||||| ||||||||||| ||||| || ||| | |||| || ||||| ||||||||
Sbjct: 1923 ggggtttgctcagtatgttcccaatgagaatcttttgatgaccaaagagcaactttttga 1982
Query: 1908 tatgacatgcatgacccttggaggtagagcagctgaacaggtattgttggggaaaatctc 1967
| |||| |||||||| ||||| ||| |||| ||||| ||||| ||| |||| || || ||
Sbjct: 1983 tgtgacttgcatgacacttggtggtcgagctgctgagcaggttttgctgggtaagatttc 2042
Query: 1968 gaccggagctcaaaatgacttggagaaagtgacaaaaatgacttatgcccaagtagcagt 2027
|| ||||| || ||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 2043 aactggagcccagaatgacttggagaaagtaacaaagatgacttatgctcaggtagcagt 2102
Query: 2028 ttatggctttagtgacaaggtggggctcctttctttccctccaagggaagattcatacga 2087
|||||| || ||||||||||| || || ||||| || || | |||||| ||| | | ||
Sbjct: 2103 ttatggtttcagtgacaaggtcggtcttctttcctttccccaaagggatgatacctttga 2162
Query: 2088 gatgtccaagccctacagcagtaagactggggcgctgattgacggtgaagtgcgagaatg 2147
|||| ||||||||| || || ||||| || || | || ||| ||||||| |||||||
Sbjct: 2163 gatgagcaagccctatagtagcaagacgggtgcaattatagacagtgaagtaagagaatg 2222
Query: 2148 ggtgggaaaggc 2159
||||||||||||
Sbjct: 2223 ggtgggaaaggc 2234
Score = 77.8 bits (39), Expect = 3e-13
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 463 cagattagtttccaagaattcaaaaataagtttcttgaaccaggtttagtcgatcatata 522
|||||||| |||||||| ||||||| ||| | |||||||| || | || |||| |||
Sbjct: 541 cagattagcttccaagagttcaaaaccaagctacttgaacctggcctggtggatcgtatt 600
Query: 523 gttgtttccaataaatcagttgcaaaagtgtatgtaaggagct 565
|||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 601 gttgtttcaaataaatcagttgcaaaggtgtacgtaaggagct 643
>29993.m001041 Cell division protein ftsH, putative
Length = 2106
Score = 89.7 bits (45), Expect = 7e-17
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 1057 attccgaaaggtgctcttttggttggtcctccaggaactggaaagacccttctagcaaag 1116
||||| ||||||| |||| |||||||||| ||||||||||| ||||| |||||||| |||
Sbjct: 811 attcccaaaggtgttcttctggttggtccaccaggaactgggaagactcttctagctaag 870
Query: 1117 gcaactgcaggggaatctggagtgccttttctgtccatttctggttcagatttcatggag 1176
|||| ||| || ||| |||| || || ||| | ||||| || ||||| || || | |||
Sbjct: 871 gcaattgctggtgaagctggcgttccatttttctccatatcaggttctgagtttgttgag 930
Query: 1177 atgtttgttggtgttgg 1193
|||||||||||||||||
Sbjct: 931 atgtttgttggtgttgg 947
>28650.m000181 conserved hypothetical protein
Length = 186
Score = 77.8 bits (39), Expect = 3e-13
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 1177 atgtttgttggtgttggaccgtccagagtgagaaacttgtttcaacaagctaggcagtgt 1236
|||||||| ||||||||||| |||| | ||||||||||||||||| |||| ||||| ||
Sbjct: 1 atgtttgtcggtgttggaccatccaaaatgagaaacttgtttcaagaagcaaggcaatgc 60
Query: 1237 gctcctagtattgtatttattgatgagattg 1267
|||||||| ||| | |||||||||| ||||
Sbjct: 61 gctcctagcattatccttattgatgaaattg 91
Score = 56.0 bits (28), Expect = 1e-06
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1587 tggggcagatattgcaaatgtttgtaatgaagctgc 1622
|||| ||||||||||||||||||| |||||||||||
Sbjct: 129 tgggacagatattgcaaatgtttgcaatgaagctgc 164