Jatropha Genome Database
- JcCB0014891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0014891.10 - phase: 0 /partial
(819 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29644.m000188 transcription factor, putative 90 2e-17
30170.m013832 WRKY transcription factor, putative 76 4e-13
29644.m000187 hypothetical protein 68 9e-11
>29644.m000188 transcription factor, putative
Length = 807
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/91 (87%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 653 cttcttctttgaagaggaagtgcagctctgaaactttgggttccggcaagtgcggttcct 712
|||||||||||||||||||||| |||||||||| | ||||||| |||||||| || ||
Sbjct: 698 cttcttctttgaagaggaagtgtagctctgaaaatctgggttctggcaagtgtgg---ct 754
Query: 713 cttccggtcggtgccattgctccaagaagag 743
|||| ||||| || |||||||||||||||||
Sbjct: 755 cttctggtcgatgtcattgctccaagaagag 785
Score = 85.7 bits (43), Expect = 4e-16
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 205 tgcaaagcagtagcagacgtcgccgtttccaaatttaaaaaagtgatttctcttcttggt 264
|||||||||||||| || | || || || ||||| || ||||| |||||||||||||||
Sbjct: 214 tgcaaagcagtagctgatgctgctgtgtctaaattcaagaaagtcatttctcttcttggt 273
Query: 265 cgaacaagaactggccatgctcgttttagacgagctcctgtttcaaatcctttaa 319
|||||||||| || |||||||| |||||| |||||||||| || | ||||||||
Sbjct: 274 agaacaagaaccggtcatgctcgctttagaagagctcctgtatctactcctttaa 328
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 368 atcaaatccttgaaagtaaggtttattatgctacgccgatccagcagattcctcctc 424
||||||| |||||||||||||| ||||| |||||||||||||||||| |||| ||||
Sbjct: 365 atcaaattcttgaaagtaaggtctattacgctacgccgatccagcaggttccacctc 421
Score = 71.9 bits (36), Expect = 6e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 486 taataatggagtgatcagtgagaggaaagaatcgtctaccaccattaatttttcttattc 545
|||||||||||| | | ||| || ||||||||||| || ||||||||||||||||||||
Sbjct: 510 taataatggagttactaatgacagaaaagaatcgtcaactaccattaatttttcttattc 569
Query: 546 ttcggctgctaactctttcctgtc 569
||| ||||| ||||| ||| ||||
Sbjct: 570 ttctgctgcaaactcattcgtgtc 593
>30170.m013832 WRKY transcription factor, putative
Length = 1134
Score = 75.8 bits (38), Expect = 4e-13
Identities = 98/118 (83%)
Strand = Plus / Plus
Query: 700 aagtgcggttcctcttccggtcggtgccattgctccaagaagagaaaattgagattaaag 759
||||||||||||||||| | || ||||||||||||||||| || |||| |||| | |||
Sbjct: 802 aagtgcggttcctcttctagccgctgccattgctccaagaaaaggaaatcgagagttaag 861
Query: 760 agagtggtgagggttcctgctattagcttgaaattggctgatattccaccagatgatt 817
||||| | ||||||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 862 agagtaatcagggttcctgcaattagtaataagatggctgatattccacctgatgatt 919
>29644.m000187 hypothetical protein
Length = 318
Score = 67.9 bits (34), Expect = 9e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 742 agaaaattgagattaaagagagtggtgagggttcctgctattagcttgaaattggctgat 801
||||| |||||||| ||||||||||| || |||| || ||||||||||| ||| |||||
Sbjct: 31 agaaagttgagattgaagagagtggtcagaattccagcaattagcttgaagttgtctgat 90
Query: 802 attccaccagatgattat 819
|| ||||| |||||||||
Sbjct: 91 ataccaccggatgattat 108