Jatropha Genome Database
- JcCB0014741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0014741.10 - phase: 0 /partial
(1514 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29827.m002614 Casbene synthase, chloroplast precursor, putative 88 2e-16
30169.m006314 Casbene synthase, chloroplast precursor, putative 78 2e-13
30065.m001155 casbene synthase, putative 74 3e-12
30065.m001152 Casbene synthase, chloroplast precursor, putative 74 3e-12
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 68 2e-10
30169.m006276 Casbene synthase, chloroplast precursor, putative 56 6e-07
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 1656
Score = 87.7 bits (44), Expect = 2e-16
Identities = 176/220 (80%)
Strand = Plus / Plus
Query: 952 gatgatacatatgatgcatatggtacacttgatgaacttaaatcttttacagctgcactt 1011
||||||||||||||||| |||||||| ||| ||||| | | |||||||||||| ||
Sbjct: 919 gatgatacatatgatgcttatggtaccattggcgaactcagactctttacagctgcattt 978
Query: 1012 gaaaggtttagcatggatgctactgacgagctaccggaatacatgaaagttatttataag 1071
||||||| || || ||||||| | | |||||||| ||||||||| | | |||| |||
Sbjct: 979 gaaaggtgcagtattgatgctattcatgagctaccagaatacatgcagtatctttacaag 1038
Query: 1072 gctatcttcaatcactttaaagaaatagggagcaatggcaatgaaggaagctcttacaaa 1131
||||| | || | ||| |||||| || || ||| ||||||||||||||||||||||
Sbjct: 1039 gctatactgaaactttttgaagaaacagagaatgatgccaatgaaggaagctcttacaaa 1098
Query: 1132 acctcttttgctagggagatgttgaaggaactgacaagag 1171
||||||| ||| | ||||||||| ||||| ||||| ||||
Sbjct: 1099 acctcttatgccaaggagatgttcaaggagctgactagag 1138
Score = 79.8 bits (40), Expect = 4e-14
Identities = 163/204 (79%)
Strand = Plus / Plus
Query: 374 ttttatttcgtgttcttaggcaacatggacataaaatgtcctgtgatgtatttaacaagt 433
|||||||||| ||||| || |||||||||| |||| | | |||||||| |||||||| |
Sbjct: 344 ttttatttcgagttctaagacaacatggacgtaaagttccttgtgatgtgtttaacaaat 403
Query: 434 tcaaagacaacaatggagagttcaagaaaaccatcatcgacgatttaaaaggtctcctta 493
||| ||| |||||||||||||||||||| |||| | ||| | ||||| |||||||
Sbjct: 404 acaaggacgacaatggagagttcaagaaagatatcaccagtgatgtgaaaggcctcctta 463
Query: 494 gcttatatgaagctagtttcttgagcgtgcatggagaagatgttttagacgaagcctttg 553
|||| ||||||||| | |||| || ||||||||||| ||||||| |||||| |||
Sbjct: 464 gcttgtatgaagcttccgttgtgagtgttcatggagaagagattttagatgaagcccttg 523
Query: 554 cttttgctatgcaacacttagaaa 577
|||| | | ||||||||| ||||
Sbjct: 524 tttttacaaagcaacacttggaaa 547
Score = 61.9 bits (31), Expect = 1e-08
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 167 aagtggaattacttaaagaaaaggtaaaggatatgttaatggaatctacaaaaga 221
|||||||| |||||||| |||||| ||||||||||||||| ||||||| |||||
Sbjct: 134 aagtggaagaacttaaaggaaaggtgaaggatatgttaatgcaatctactaaaga 188
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 1668
Score = 77.8 bits (39), Expect = 2e-13
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 949 gtagatgatacatatgatgcatatggtacacttgatgaacttaaatcttttacagctgca 1008
|||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 922 gtagatgatacatacgatgcatatggtacacttgatgaactccaacgttttacaaatgca 981
Query: 1009 cttgaaaggtttagcatggatgctactgacgagctaccggaatacatgaaagttattta 1067
|| |||||| ||| ||||||| ||| || ||||| || |||||||||||| ||||
Sbjct: 982 tttcaaaggtgcgacattgatgctattgatgaactaccagattacatgaaagttcttta 1040
>30065.m001155 casbene synthase, putative
Length = 471
Score = 73.8 bits (37), Expect = 3e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 949 gtagatgatacatatgatgcatatggtacacttgatgaact 989
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 427 gtagatgatacatatgatgcatatggtacaattgatgaact 467
Score = 54.0 bits (27), Expect = 3e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 733 tttgcaaagttggactataatagactacaattgttgtatagacaagagctggccttgctg 792
|||||||||||||| | |||| | ||||||| ||||| | ||||||||| |||| ||
Sbjct: 211 tttgcaaagttggattttaatcggttacaattattgtacaaacaagagctagcctctctc 270
Query: 793 tcgaggtggtggaaagacctaaatctg 819
|| | ||||||||||||| ||||||||
Sbjct: 271 tcaaagtggtggaaagacttaaatctg 297
>30065.m001152 Casbene synthase, chloroplast precursor, putative
Length = 849
Score = 73.8 bits (37), Expect = 3e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 949 gtagatgatacatatgatgcatatggtacacttgatgaact 989
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 112 gtagatgatacatatgatgcatatggtacaattgatgaact 152
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 1431
Score = 67.9 bits (34), Expect = 2e-10
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 487 ctccttagcttatatgaagctagtttcttgagcgtgcatggagaagatgttttagacgaa 546
|||||||||||||| ||||| | || | || ||||||||||||||| ||||||| |||
Sbjct: 349 ctccttagcttatacgaagccacctttctaagtgtgcatggagaagatattttagatgaa 408
Query: 547 gcctttgcttttgctatgcaacacttagaaatcttagctgcccagtcaagcccaaatctt 606
|| |||||||| | | ||||||||| |||| |||||||| | |||||||| | |||
Sbjct: 409 gcacttgcttttacaaggcaacacttggaaaccttagctgagaaatcaagccctcacctt 468
Query: 607 gcaaaacatataaggaat 624
|||| |||||| ||||||
Sbjct: 469 gcaagacatatcaggaat 486
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 952 gatgatacatatgatgcatatggtacacttgatgaact 989
||||||||||||||| ||||||||||| ||||||||||
Sbjct: 691 gatgatacatatgattcatatggtacatttgatgaact 728
>30169.m006276 Casbene synthase, chloroplast precursor, putative
Length = 1845
Score = 56.0 bits (28), Expect = 6e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 733 tttgcaaagttggactataatagactacaatt 764
|||||||||||||||||||||||| |||||||
Sbjct: 841 tttgcaaagttggactataatagagtacaatt 872