Jatropha Genome Database

JcCB0014511.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0014511.10 - phase: 1 /pseudo/partial
         (918 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002422 lipoxygenase, putative                                   52   6e-06

>29851.m002422 lipoxygenase, putative
          Length = 2514

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                        
Query: 473  aattggtggcctaaactttcgactcctgatgatcttacatctattctcaccaccatcata 532
            ||||||||||| | ||| || ||||| || |||||||  ||||| || |  || ||||| 
Sbjct: 1984 aattggtggccaagactctcaactccagacgatcttatctctatacttagtacgatcatc 2043

                                                  
Query: 533  tggattgtatcagcacaacatgcaacaataaattttgg 570
            ||||||| |||||||||||||||| || | ||||||||
Sbjct: 2044 tggattgcatcagcacaacatgcagcactcaattttgg 2081