Jatropha Genome Database
- JcCB0013651.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0013651.10 - phase: 0
(912 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29842.m003530 NSFL1 cofactor p47, putative 807 0.0
29948.m000697 UBX domain-containing protein, putative 66 4e-10
>29842.m003530 NSFL1 cofactor p47, putative
Length = 918
Score = 807 bits (407), Expect = 0.0
Identities = 790/918 (86%), Gaps = 6/918 (0%)
Strand = Plus / Plus
Query: 1 atggcatcgcgagacaagaaaccagccaagccttcgagcagtcgtaccggcggtatccgc 60
||||||||| ||||||||||||| |||| | || |||||||| |||| |||||||||
Sbjct: 1 atggcatcgaaagacaagaaaccatccaaatcatcaagcagtcgcgccggaggtatccgc 60
Query: 61 actctttccgatctgaacagacgttccggtcccgattctgacagcgacgatgatgctccc 120
||||| |||||||| ||| | | | | |||||||| || ||||||||||| || |||||
Sbjct: 61 actctctccgatcttaaccgccatactggtcccgactccgacagcgacgacgacgctcct 120
Query: 121 caagagtactacaccggtggcgaaaagagtggtatgcttgttcaagatcctacaaagggt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 caagagtactacactggtggcgaaaagagtggtatgcttgttcaagatccttcaaagggt 180
Query: 181 a------atgatgtggatgcaatattcaatcaagctaggcaattaggagctgttgaaggt 234
| ||||||| ||||| || |||||||||||||||||| | ||||||||||| |||
Sbjct: 181 aatggtaatgatgttgatgcgatcttcaatcaagctaggcaactgggagctgttgagggt 240
Query: 235 cctctcgatcaatttcgtccatcttcaagctccagaagctttactggaactggtagatta 294
||||| |||| |||| |||||||||||||| ||||||||||| || |||||||| |||
Sbjct: 241 cctcttgatccgcttcgcccatcttcaagctcgagaagctttaccgggactggtaggtta 300
Query: 295 ctctcaggggaaactgtaccatctgctcctcagcaacctgaggctgttattcacaatatt 354
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 ctctcaggggaaactataccatctgctcctcagcaacctgaggctgtcattcacaatatt 360
Query: 355 gttttctggactaatggtttcactgtaaacgatggccctttgagaaggttggacgatcct 414
||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||||
Sbjct: 361 gttttctggacaaatggtttcaccgtaaatgacggtcctttgaggaggttggatgatcct 420
Query: 415 gaaaatgcatctttcttagagagcatccgaaagtccgagtgcccaaaggaacttgagcca 474
||||||||| ||||||||||||||||| ||||||| || || |||||||| |||| |||
Sbjct: 421 gaaaatgcacctttcttagagagcatcagaaagtctgaatgtccaaaggagcttgcgcct 480
Query: 475 gaggatagaaggtcctcagttcatgtcaatttgattagaagggatgaacaatgtccagaa 534
| ||| ||||||| ||||| |||||||||||||| |||||||| ||||| ||||| ||
Sbjct: 481 gcagatcgaaggtcttcagtccatgtcaatttgataagaagggaggaacagtgtcctgag 540
Query: 535 ccagagaagcagcgccacgttccatttcagggtgtggggagaactttaggtagcagtacc 594
|||||||||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 541 ccagagaagcagcgccacgttccatttcagggtgtgggtagaaccctgggtagcagctgt 600
Query: 595 ccaacgacaactgaaccaacagtcgatccaactcctcttaacactgctccgacgccatct 654
| | ||| ||||||||| | | || |||| ||| | ||||||||||| || | ||
Sbjct: 601 actgcagcaagtgaaccaactgccaattcaacccctgtcaacactgctccaacttcttcc 660
Query: 655 atgggcctggttgtgaatgaaacattgccatcaacttcaatccagcttaggttggcagat 714
||||| | |||||| ||||| |||||||||| |||||||| ||||| ||||||||||||
Sbjct: 661 atgggtgtagttgtggatgaatcattgccatcgacttcaattcagctaaggttggcagat 720
Query: 715 gggacccgcatgattgctcacttcaatttcaatcataccgtgaatgatattcgagctttc 774
|| |||||||||||||| |||||||||| | | || || |||||||||||||||||||||
Sbjct: 721 ggaacccgcatgattgcccacttcaattaccaccacactgtgaatgatattcgagctttc 780
Query: 775 attaatgcatctagacctggaggtgctcagaattatcagctgcagctgatgggatttcca 834
||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 781 attgatgcatcaagacctggcggcgctcagaattatcagctgcagctgatgggatttcct 840
Query: 835 cccaagcttctttctgacccaactcaaacaatagaggaagcagggcttggaaattcagtt 894
|| |||||||| ||| |||||||| ||||||||| |||| ||||||| |||||||||
Sbjct: 841 cctaagcttctaggtgatccaactcagacaatagagcaagctgggcttgccaattcagtt 900
Query: 895 gttattcagaaattctag 912
||||||||||||||||||
Sbjct: 901 gttattcagaaattctag 918
>29948.m000697 UBX domain-containing protein, putative
Length = 1281
Score = 65.9 bits (33), Expect = 4e-10
Identities = 156/197 (79%)
Strand = Plus / Plus
Query: 259 tcaagctccagaagctttactggaactggtagattactctcaggggaaactgtaccatct 318
||||| || |||||||| ||||| ||||| |||||||| || || || ||||| |||||
Sbjct: 631 tcaagttctagaagcttcactgggactgggagattactatcgggtgagactgttccatcc 690
Query: 319 gctcctcagcaacctgaggctgttattcacaatattgttttctggactaatggtttcact 378
|||||||| | | || ||||||| | ||||||| | ||| |||| ||||| || |||
Sbjct: 691 gctcctcaaccatctcaggctgtcaatcacaatgtcactttttggaggaatggctttact 750
Query: 379 gtaaacgatggccctttgagaaggttggacgatcctgaaaatgcatctttcttagagagc 438
||||| |||||||||||| |||| || || ||||| |||||| | || |||||||||
Sbjct: 751 gtaaatgatggccctttgcgaagatttgatgatccctctaatgcagcctttttagagagc 810
Query: 439 atccgaaagtccgagtg 455
||| |||||||||||
Sbjct: 811 atcaagaagtccgagtg 827