Jatropha Genome Database

JcCB0013291.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0013291.20 - phase: 0 /pseudo/partial
         (471 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29889.m003302 map3k delta-1 protein kinase, putative                  365   e-100

>29889.m003302 map3k delta-1 protein kinase, putative
          Length = 2391

 Score =  365 bits (184), Expect = e-100
 Identities = 250/272 (91%)
 Strand = Plus / Plus

                                                                        
Query: 200  tgtgggaacttgccactgagaagatcccttgggataatctcaactcaatgcaggtgattg 259
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 tgtgggagcttgccactgagaagatcccttgggataatctcaactcaatgcaggtgattg 2176

                                                                        
Query: 260  gagctgtaggtttcatgaaccaacgcttagagatccccaaagatgttgatccacagtggg 319
            |||||||||| |||||||||||||| || ||||||||||| ||||| ||||||| |||||
Sbjct: 2177 gagctgtagggttcatgaaccaacggttggagatccccaaggatgtggatccactgtggg 2236

                                                                        
Query: 320  cttctacaattgagagttgctggcacagcaatcctcagtgccgtccatctttccaagaac 379
            |||||| |||||||||||||||||||||  ||||||||||||||||  | ||||| ||||
Sbjct: 2237 cttctataattgagagttgctggcacagtgatcctcagtgccgtcccacgttccaggaac 2296

                                                                        
Query: 380  tgctggaaaagcttagggatctgcagagacaatacgcaattcaattccaggcggcccgtt 439
            ||||||| ||||| || |||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 2297 tgctggagaagctaagagatctgcaaagacaatacgcaattcaattccaagcagcccgtt 2356

                                            
Query: 440  ctgcagctggagataacacacaaaaggaatta 471
            | |||||||| |||||||||||||||||||||
Sbjct: 2357 ccgcagctggggataacacacaaaaggaatta 2388



 Score =  161 bits (81), Expect = 5e-39
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                        
Query: 78   aggttggtgattttggtctatcgcgtctaaagcatgaaacttacttgacaactaagactg 137
            ||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||| |
Sbjct: 1967 aggttggtgattttggtttatcccgtctaaagcacgaaacttatttgacaactaagaccg 2026

                                                                        
Query: 138  ggaagggaacgcctcaatggatggcgccagaagttttgcgaaatgaaccctcagatgaaa 197
            ||||||||||||||||||||||||| ||||||||| | || |||||||| ||||||||||
Sbjct: 2027 ggaagggaacgcctcaatggatggcaccagaagttctacggaatgaaccatcagatgaaa 2086

             
Query: 198  a 198
            |
Sbjct: 2087 a 2087