Jatropha Genome Database

JcCB0013291.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0013291.10 + phase: 0 
         (336 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29889.m003303 conserved hypothetical protein                          482   e-136

>29889.m003303 conserved hypothetical protein
          Length = 336

 Score =  482 bits (243), Expect = e-136
 Identities = 312/335 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagggtgcagatgaaggaggtatagagagagttgttgactccaaggacttacaacaa 60
           ||||||| | ||||||||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 1   atggaggttacagatgaaggaggaatagagagagttgttgattctaaagacttacagcaa 60

                                                                       
Query: 61  caaagcaaagcccttgataagctcactgaccgtgtcgaagatcgccagctcgattccact 120
           ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  caaagcaaagcacttgataagctcactgaccgtgttgaagatcgccagctcgattccact 120

                                                                       
Query: 121 cgcgttcaagaggctatggcttcgattgctgcatcttcagaagccgattggaatgctatg 180
           |||||||||||||||||||||||||||||||||||  | ||||| ||| |||||||||||
Sbjct: 121 cgcgttcaagaggctatggcttcgattgctgcatcagccgaagctgataggaatgctatg 180

                                                                       
Query: 181 agaatgagggagaaggaattggctgctgttaagatcaatgctgctgatgtggacataata 240
           ||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| 
Sbjct: 181 agattgagggagaaagaattggctgctgttaagatcaacgctgctgatgttgacataatt 240

                                                                       
Query: 241 gctaatgaactagagttggataagaaggtagcagagagaaccttaagagagcacaaaggt 300
           || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 241 gccaatgaactagagttggataagaaggtcgcagagagaaccttaagggagcacaaaggt 300

                                              
Query: 301 gatgcagttgctgcaattcaacatcttcttcgcta 335
           ||||| |||||||||||||||||||||||||||||
Sbjct: 301 gatgctgttgctgcaattcaacatcttcttcgcta 335