Jatropha Genome Database
- JcCB0013151.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0013151.20 - phase: 0
(666 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007102 conserved hypothetical protein 161 7e-39
29279.m000131 transcription factor, putative 92 5e-18
30170.m014124 transcription factor, putative 90 2e-17
>30131.m007102 conserved hypothetical protein
Length = 600
Score = 161 bits (81), Expect = 7e-39
Identities = 143/163 (87%), Gaps = 3/163 (1%)
Strand = Plus / Plus
Query: 1 atgatgagacaaggaggactattaggtggatcaagatgtcaagattgtggaaaccaagca 60
||||||||||||||||| |||||||| |||||||||||||| || |||||||||||
Sbjct: 4 atgatgagacaaggaggt---ttaggtggttcaagatgtcaagactgcggaaaccaagcc 60
Query: 61 aagaaagagtgtgtacatatgagatgtagaacttgttgtaaaagcaaagggtttgagtgc 120
|||||||| ||||| ||||||| || ||||||||||||||||| ||||| ||| | |||
Sbjct: 61 aagaaagattgtgtttatatgaggtgcagaacttgttgtaaaagtaaaggatttcactgc 120
Query: 121 caaacacacgtcaaaagcacctggattcctgcttacagaaggc 163
|||||||||||||||||||| ||| |||||||||| |||||||
Sbjct: 121 caaacacacgtcaaaagcacttgggttcctgcttatagaaggc 163
Score = 121 bits (61), Expect = 6e-27
Identities = 129/151 (85%), Gaps = 3/151 (1%)
Strand = Plus / Plus
Query: 276 gaattttccagctgaagtgaactctatagctacatttcgttgctttagaatgagctccat 335
||||||||| ||||||||||||||| ||||||||||||| ||| ||||| ||||||| ||
Sbjct: 264 gaattttcctgctgaagtgaactctttagctacatttcgctgccttagagtgagctctat 323
Query: 336 tgatgaagaaggagattatcaattagcttatcaaacaagtgtgggaattggcggccatgt 395
|||| ||||||||| |||| || || ||||| |||||| || | || || ||||||||
Sbjct: 324 tgat---gaaggagatgatcagtttgcatatcagacaagtatgagtataggaggccatgt 380
Query: 396 gtttcagggtatcctttatgatcaaggtcct 426
||| ||||||| ||||||||||||||||||
Sbjct: 381 ttttaagggtattctttatgatcaaggtcct 411
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 604 tacccatttccccttaatgctttcacgtccggtacgcaacttttcctgcatccaaaa 660
||||| |||||| |||||||||||| ||||||||||||||||||| |||| ||||||
Sbjct: 538 tacccttttccctttaatgctttcatgtccggtacgcaacttttcttgcacccaaaa 594
>29279.m000131 transcription factor, putative
Length = 1053
Score = 91.7 bits (46), Expect = 5e-18
Identities = 100/118 (84%)
Strand = Plus / Plus
Query: 37 tgtcaagattgtggaaaccaagcaaagaaagagtgtgtacatatgagatgtagaacttgt 96
|||||||||||||| || |||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 358 tgtcaagattgtggcaatcaagcaaagaaagactgtgtacacatgcggtgtagaacttgc 417
Query: 97 tgtaaaagcaaagggtttgagtgccaaacacacgtcaaaagcacctggattcctgctt 154
|| || ||| ||| ||||| |||||||| || || |||||||| ||| |||||||||
Sbjct: 418 tgcaagagccgaggatttgactgccaaacccatgttaaaagcacttgggttcctgctt 475
>30170.m014124 transcription factor, putative
Length = 936
Score = 89.7 bits (45), Expect = 2e-17
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 37 tgtcaagattgtggaaaccaagcaaagaaagagtgtgtacatatgagatgtagaacttgt 96
||||||||||||||||| ||||| || ||||| |||| || |||||||||||||||||
Sbjct: 277 tgtcaagattgtggaaatcaagcgaaaaaagattgtgctcacttgagatgtagaacttgt 336
Query: 97 tgtaaaagcaaagggtttgagtgccaaacacacgtcaaaagcacctggattcctgct 153
||||||||| ||||||| ||||||||| ||||| || ||||| ||| | ||||||
Sbjct: 337 tgtaaaagccgagggtttctgtgccaaactcacgttaagagcacttgggtccctgct 393