Jatropha Genome Database

JcCB0013151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0013151.10 - phase: 1 /partial
         (866 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007101 DNA replication licensing factor MCM4, putative         343   1e-93

>30131.m007101 DNA replication licensing factor MCM4, putative
          Length = 2604

 Score =  343 bits (173), Expect = 1e-93
 Identities = 383/453 (84%)
 Strand = Plus / Plus

                                                                       
Query: 393 gaagaagggaagtatgtgaaagctatacgtaaagtgcttgaagttgaaggggaagggctt 452
           ||||||||||||||| |||| |  |||  || |||| | ||| ||||||| ||| |||||
Sbjct: 409 gaagaagggaagtatatgaaggggataaatagagtgttggaaattgaaggagaatggctt 468

                                                                       
Query: 453 gatgttgatgcacatgatgtgtttgattatgattctgatttatacgcgaagatggttagg 512
           ||||||||||  ||||||||||||||||||||||||||||| ||    || |||||||||
Sbjct: 469 gatgttgatgggcatgatgtgtttgattatgattctgatttgtataataaaatggttagg 528

                                                                       
Query: 513 tacccactcgaggttttggccatttttgatattgttttgatggattttgtgggtttaatg 572
           || ||||| ||||||||||| ||||||||||| |||||||||||| ||||  |||| || 
Sbjct: 529 tatccacttgaggttttggctatttttgatatcgttttgatggatattgttagtttgatt 588

                                                                       
Query: 573 gatcctcttttcgagaagcatgtgcaagtgaggatttataatctcaagacttctaccaca 632
            ||||| | ||||| |||||||| ||||| ||||||| | |||||||||||||||| || 
Sbjct: 589 aatcctttgttcgacaagcatgttcaagtcaggattttttatctcaagacttctactact 648

                                                                       
Query: 633 atgagaaatcttaacccttctgatatcgagaagatggtgtcgctcaagggaatgataatt 692
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 649 atgagaaatcttaacccttctgatatcgagaagatggtttcgctcaaaggaatgataatt 708

                                                                       
Query: 693 cgttgtagttctatcataccggagattagggaagcaatatttagatgccttgtgtgtggg 752
           || || |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 709 cgatgcagttctataataccagagatcagggaagcaatatttagatgccttgtatgtggc 768

                                                                       
Query: 753 aacgttgctggtccatttcttgtagaaagaggaaggataaatgaacctactgtatgcttg 812
            || |  | |  ||  || |||| || |||||||||||||||||||||||    |||| |
Sbjct: 769 tacttatcagaccctattgttgtggatagaggaaggataaatgaacctacaaattgctcg 828

                                            
Query: 813 aagcaagaatgtcttgctaagaactctatgaca 845
           ||| |||| || |||||||  ||||||||||||
Sbjct: 829 aaggaagagtgccttgctagaaactctatgaca 861