Jatropha Genome Database

JcCB0012961.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0012961.30 - phase: 0 /pseudo/partial
         (298 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29747.m001096 receptor serine/threonine kinase, putative               76   1e-13
30066.m000741 receptor serine/threonine kinase, putative               68   3e-11
30066.m000743 receptor serine/threonine kinase, putative               68   3e-11

>29747.m001096 receptor serine/threonine kinase, putative
          Length = 675

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 78  atttatcaatgaagttgcaagcatcagtagaacttcccatgtcaacattgttactctttc 137
           |||| ||||||| || |||||||| ||||||||||| ||||||||||| |||||||||| 
Sbjct: 165 atttgtcaatgaggtagcaagcattagtagaacttctcatgtcaacatcgttactctttt 224

                 
Query: 138 aggatt 143
           ||||||
Sbjct: 225 aggatt 230


>30066.m000741 receptor serine/threonine kinase, putative
          Length = 1308

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                       
Query: 78  atttatcaatgaagttgcaagcatcagtagaacttcccatgtcaacattgttactctttc 137
           |||||||||||| || || ||||| || |||||||| ||||||||| |||||||||||| 
Sbjct: 396 atttatcaatgaggtcgcgagcattagcagaacttctcatgtcaacgttgttactctttt 455

                 
Query: 138 aggatt 143
           ||||||
Sbjct: 456 aggatt 461


>30066.m000743 receptor serine/threonine kinase, putative
          Length = 1218

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                       
Query: 78  atttatcaatgaagttgcaagcatcagtagaacttcccatgtcaacattgttactctttc 137
           |||||||||||| || || ||||| || |||||||| ||||||||| |||||||||||| 
Sbjct: 381 atttatcaatgaggtcgcgagcattagcagaacttctcatgtcaacgttgttactctttt 440

                 
Query: 138 aggatt 143
           ||||||
Sbjct: 441 aggatt 446