Jatropha Genome Database

JcCB0012961.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0012961.10 - phase: 2 /pseudo/partial
         (1078 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29910.m000926 aspartyl-tRNA synthetase, putative                      297   7e-80

>29910.m000926 aspartyl-tRNA synthetase, putative
          Length = 1623

 Score =  297 bits (150), Expect = 7e-80
 Identities = 249/282 (88%)
 Strand = Plus / Plus

                                                                        
Query: 614  tttaagctggactacaaggggcaacctgcatgcttggctcagtcacatcaacttcacaag 673
            ||||||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||
Sbjct: 820  tttaagctggactacaaagggcaacctgcatgcttggcgcagtcacctcagcttcacaag 879

                                                                        
Query: 674  caaatggcaatctgtggtgataaagaacgtgtctttgaggtcggttctgttttcaaagca 733
            |||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||||| ||||
Sbjct: 880  caaatggctatctgtggtgataaagagcgtgtttttgaggttggtcctgttttcagagca 939

                                                                        
Query: 734  gaggaatcttacacacctaggcatctctgcgagtttgtgggtcatgatgttgaaatggag 793
            ||||| |||||||| | ||||||||| ||||||||||| |||| ||||||||||||||||
Sbjct: 940  gaggattcttacacccataggcatctttgcgagtttgttggtcttgatgttgaaatggag 999

                                                                        
Query: 794  attaaaaaacactattctgaggtaatggatgttgttgatcggttatttatcacgattttt 853
            || || || || ||||||||||| |||||| |||| |||||||||||| |||  || || 
Sbjct: 1000 ataaagaagcattattctgaggtcatggatattgtggatcggttatttgtcaaaatgttc 1059

                                                      
Query: 854  gactatttgaatgagcattgcaagaatgaacttgaggctgtt 895
            ||||| ||||||||| | |||||||| |||||||| ||||||
Sbjct: 1060 gactacttgaatgagaagtgcaagaaggaacttgatgctgtt 1101



 Score = 65.9 bits (33), Expect = 5e-10
 Identities = 114/141 (80%)
 Strand = Plus / Plus

                                                                       
Query: 195 tgttgtcgttagacagaaggggttcactgtccagtgtgtggttactattaaacctgggtt 254
           |||||| ||||||||||| ||||| || || ||||||||||||||| || |  |||  ||
Sbjct: 333 tgttgtggttagacagaaagggtttacggtgcagtgtgtggttactgttcaggctgattt 392

                                                                       
Query: 255 ggttagccgccagatgtttgtttttgtggctggcattagcctggaatcgattattgatgt 314
           |||||||||||| ||| ||   |||||||||||  | ||||  || || ||| |||||||
Sbjct: 393 ggttagccgccaaatggttaagtttgtggctgggttgagccgtgagtctattgttgatgt 452

                                
Query: 315 tcgaggctttgtttcggttcc 335
           ||||||  ||||||| |||||
Sbjct: 453 tcgaggtgttgtttctgttcc 473