Jatropha Genome Database
- JcCB0012281.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0012281.10 - phase: 0
(1602 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011062 f11m21.29 protein, putative 720 0.0
>30190.m011062 f11m21.29 protein, putative
Length = 1515
Score = 720 bits (363), Expect = 0.0
Identities = 887/1062 (83%), Gaps = 9/1062 (0%)
Strand = Plus / Plus
Query: 487 actgtaaagccaaatcttccgaggtgttcaactttgatgaaacccacagcaagcatgttg 546
|||||||||||||||||||| ||| | ||||||||||||||||| ||||||||| | |||
Sbjct: 436 actgtaaagccaaatcttcctaggagatcaactttgatgaaacctacagcaagcgtattg 495
Query: 547 gcaaagcaaaatcgtctgcttcatgtcaatggttccagacttcagatgctactggttcaa 606
|| |||||||||| | | ||| | ||||||||||| ||||| ||||| | | ||||
Sbjct: 496 gccaagcaaaatcagcgccctcaaggtgatggttccagatttcagctgctatttgatcaa 555
Query: 607 aaggagaagagcttatgcaattcta-tg--gtggaaagtcaagctgccaagaggcagaag 663
|||||||| ||| |||| | |||| || || |||||||||||||| |||||||| |||
Sbjct: 556 aaggagaaaagcatatgtagttcttctgcagttgaaagtcaagctgcaaagaggcaaaag 615
Query: 664 ctagaaggaggtcactcttgtagggttggtgatgcaaagcaacaagctgatttcatccac 723
||||| ||||| ||||| ||| | |||| ||||||||||| ||| |||||| |||||
Sbjct: 616 ctagagggaggccactcccgtaagtttggcgatgcaaagcagcaaatagatttcgtccac 675
Query: 724 aaggcacctaaaaaggatggagctgttgataaaagttgtgctcattcaaagctcaggctc 783
|||||||||| |||||| ||| || |||||||| | | |||||| |||| ||| |||||
Sbjct: 676 aaggcacctagaaaggaaggaactattgataaatgctctgctcagtcaaggctgaggctt 735
Query: 784 accattcctagagagcctgacctggaaacagcacatagggcacaaaggattaggcnnnnn 843
|| ||||| ||||||||||| || |||||||||||| |||| || ||||| ||||
Sbjct: 736 actattccaagagagcctgatcttgaaacagcacatcgggctcataggatgaggcctaaa 795
Query: 844 nntaccacacgatttgaatgtgtaacggtggctgtacaaagattcaaagcacgcccattg 903
|| |||| | ||||| ||| || ||||||| ||||||||| ||||| || |||||
Sbjct: 796 aataacacagaagttgaacatgtgacagtggctgcacaaagatttaaagctcgtccatta 855
Query: 904 aatagaaaaattctcgaggctccctcgttgcctcttccaaagaagagtactccaaagttg 963
|| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 856 aacagaaaaattctcgaggctccttcattgcctcttccaaagaagagcactccaaagttg 915
Query: 964 ccagagtttcaagaatttcaccttaagacatcagagagggcaatgcagcatgcatctgca 1023
|||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| || |
Sbjct: 916 ccagagttccaagaatttcatcttaagacattagagagggcaatgcagcatgcatttgta 975
Query: 1024 gtttcatctacctcgtttcagtgcaatgattctgaacaggggttggacaaacctactaca 1083
||||| ||| |||| ||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 976 gtttcttcttcctcacttcagcacaatgattctgaacaggggttggacaaatctactaca 1035
Query: 1084 atttccgttgcagagatggggaacagagaatccagaagaccaagcacaatggatgctcaa 1143
|||| |||||||| || || || |||||||| |||||||||||||| ||||| || ||
Sbjct: 1036 gtttctgttgcagaaattggaaagagagaatctagaagaccaagcactgtggatactaaa 1095
Query: 1144 aagcaagatggatgtagcacaacacacatattcaaagctcgccctttgaataagaagata 1203
||||| |||||||| || || |||| |||| |||||||| ||| ||||||||||||||
Sbjct: 1096 aagcaggatggatgcagtgcaccacatgtatttaaagctcgtcctctgaataagaagata 1155
Query: 1204 ttcacaagtaaaggggacattggtattttccgaaacagcaagcgggagaccacagtgccg 1263
|||||||||||||| || |||||| |||||||||| ||||||||||| |||||||||||
Sbjct: 1156 ttcacaagtaaaggtgatattggtgttttccgaaatagcaagcgggaaaccacagtgcca 1215
Query: 1264 ctggaatttaacttccgtacagaaaagaggattcagcatgacccacctacagaacttttc 1323
||||||||| || | |||||||||||||||||| ||| | ||||| | ||| ||||||
Sbjct: 1216 acggaatttaattttcatacagaaaagaggattcatcataatccacccatagatcttttc 1275
Query: 1324 agtaagctctctctgaaagctgagctccagacaaataatggatctcggctgcaattgccc 1383
|||||||| || ||| | | ||||||||| |||||||||||| |||| ||||||||||
Sbjct: 1276 agtaagctatccctggcatccgagctccagccaaataatggatttcggttgcaattgcct 1335
Query: 1384 cgaccaagttttttatccataaatggctcaaaagaaaatagattgaatcatttgcaaaca 1443
|||||||| || | |||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 1336 cgaccaagcttaatgtccataaagggctcaaaagaaaatagattgaatcatctacaaacg 1395
Query: 1444 gaacataaga------cgacacatttgatgaaagaaaagccatctatttttggtggaaag 1497
|| ||||||| |||||||| |||||||||||| |||||||||||||||
Sbjct: 1396 gagcataagataacagtgacacattcagcaaaagaaaagccactgatttttggtggaaag 1455
Query: 1498 cagactcaatgcagtgaagtggcaaaccaattgagcatgagg 1539
|||||||||| ||||||||| | ||| |||||||||||||||
Sbjct: 1456 cagactcaatccagtgaagttggaaatcaattgagcatgagg 1497
Score = 121 bits (61), Expect = 1e-26
Identities = 162/195 (83%), Gaps = 3/195 (1%)
Strand = Plus / Plus
Query: 7 atggaaatggaaatggaagaggaa---attgaaatgcaatttgtgtttgaggcgcgtgaa 63
|||||||||||||||||||| ||| || ||| || | || ||||| |||||||||||
Sbjct: 1 atggaaatggaaatggaagatgaagaaatggaagtggagttagtgttcgaggcgcgtgag 60
Query: 64 attgatatcgattatgagtttgatgcggcaatgttcttcgatttcacccgtgaggagtct 123
||||| | ||||| || |||||||| ||||||||||| |||||||| ||| | |||||
Sbjct: 61 gttgatcttgattacgaatttgatgctgcaatgttctttgatttcacgcgtcaagagtca 120
Query: 124 gctgctgacgcgcgtcaggctgagcggtggttcgagacggctcagagctatcctccatcg 183
||| || |||| | |||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 121 cttgcggaggcgcatgaggctgagcggtggtttgatacggctcagagctatcctccttct 180
Query: 184 ccttttgttgcaaag 198
|||||||| ||||||
Sbjct: 181 ccttttgtggcaaag 195