Jatropha Genome Database
- JcCB0011781.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0011781.10 - phase: 0
(786 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29908.m006006 Endoplasmic reticulum-Golgi intermediate compartme... 999 0.0
28515.m000316 Endoplasmic reticulum-Golgi intermediate compartme... 151 7e-36
>29908.m006006 Endoplasmic reticulum-Golgi intermediate compartment
protein, putative
Length = 1161
Score = 999 bits (504), Expect = 0.0
Identities = 711/780 (91%)
Strand = Plus / Plus
Query: 7 attgacaagcctttgcagagacatggtggcaggcttgagcataatgagacatattgtggt 66
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attgaaaaccctttgcagagacatggtggcaggcttgagcataatgagacatattgtggc 441
Query: 67 tcctgttatggtgctgaagcgtcagatgaagattgttgtaataattgtgaggaagttcgt 126
|||||||||||||||||||| |||||||| |||||||||||| |||||||| || ||
Sbjct: 442 tcctgttatggtgctgaagcatcagatgaggattgttgtaattcctgtgaggatgtccgg 501
Query: 127 gaagcatatcgaaagaaaggttgggcgctgtcaaatccagacctgattgaccagtgcaaa 186
||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 502 gaagcatatcggaagaaaggttgggcgttgtcaaatccagatttgattgaccagtgcaag 561
Query: 187 agggaaggttttttacagaggattaaagatgaagaaggtgaagggtgcaacatctatgga 246
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 562 agagaaggtttcctacagaggattaaagatgaagaaggtgaagggtgcaacatttatgga 621
Query: 247 ttcttggaagttaataaggtggccggtaattttcactttgcacctggcaaaagttttcaa 306
||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||||
Sbjct: 622 ttcttggaagttaataaggtggctggtaattttcacttcgcacctggaaagagttttcaa 681
Query: 307 caatcaaatgttcatgtgcatgatctgctggcgtttcaaaaggacagttttaatataagt 366
|||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||
Sbjct: 682 caatcaaatgttcatgtgcatgatctactggcattccaaaaggatagttttaatataagt 741
Query: 367 cacaaaattaataggctcactttcggagaatattttcctggtgttgtaaatcctcttgat 426
||||| |||||| |||| |||| || || ||||||||||||||||| || |||||||||
Sbjct: 742 cacaagattaatcggctagcttttggggattattttcctggtgttgtgaaccctcttgat 801
Query: 427 ggcgtgcattggacacaagaaactccaagtgggatgtaccagtattttctcaaggttgta 486
|| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 802 ggtgtgcactggacacaagaaactccaagtgggatgtaccagtattttatcaaggttgta 861
Query: 487 cctactgtatacacagatgtcagtgggcacactatccagtcaaatcagttttccgtgacc 546
|||||||| ||||||||||| || || |||| || ||||| || |||||||| |||||
Sbjct: 862 cctactgtttacacagatgttagcggatacacgattcagtcgaaccagttttcagtgact 921
Query: 547 gaacatttcaggagtgcagaggcaggccgtctgcaagcccttcctggagttttcttcttt 606
|||||||| ||||||||||| ||||| || || ||| |||| || ||||| |||||||||
Sbjct: 922 gaacattttaggagtgcagaagcaggtcgccttcaatccctcccaggagtattcttcttt 981
Query: 607 tatgacctttctccaattaaggtgactttcacagagcagcatgtatcattcttgcacttc 666
||||| |||||||| ||||||||||||||||||||| |||| || |||||||||||||||
Sbjct: 982 tatgatctttctcccattaaggtgactttcacagaggagcacgtgtcattcttgcacttc 1041
Query: 667 ctaacaaatgtgtgcgctattgttggaggtgttttcactgtttcgggaatactggattca 726
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ctaacgaatgtgtgcgctatagttggaggtgttttcactgtttcgggaatactggattcg 1101
Query: 727 tttatatatcacggtcaaaaggcaatcaagaagaagatggaaattggtaaatttagttga 786
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 tttatatatcatggtcaaaaggcaatcaagaagaagatggaaattggtaaatttagttga 1161
>28515.m000316 Endoplasmic reticulum-Golgi intermediate compartment
protein, putative
Length = 798
Score = 151 bits (76), Expect = 7e-36
Identities = 376/476 (78%)
Strand = Plus / Plus
Query: 7 attgacaagcctttgcagagacatggtggcaggcttgagcataatgagacatattgtggt 66
||||| |||||||| ||||| ||||||||||| |||||||| || || || ||||| |||
Sbjct: 115 attgagaagcctttacagaggcatggtggcagacttgagcacaacgaaacttattgcggt 174
Query: 67 tcctgttatggtgctgaagcgtcagatgaagattgttgtaataattgtgaggaagttcgt 126
|| ||||||||||| ||| ||||||||| ||||||||||| ||||| |||||||||
Sbjct: 175 tcatgttatggtgcagaaatgtcagatgatgattgttgtaactcgtgtgatgaagttcgt 234
Query: 127 gaagcatatcgaaagaaaggttgggcgctgtcaaatccagacctgattgaccagtgcaaa 186
|| ||||| | || || |||||||||||| || | || |||| ||||||||||||
Sbjct: 235 gaggcatacaggaaaaagggttgggcgctgacaggtgtggatttgatcgaccagtgcaaa 294
Query: 187 agggaaggttttttacagaggattaaagatgaagaaggtgaagggtgcaacatctatgga 246
| ||||||||| | |||| | | ||||||||||||||||||||||| || || ||||||
Sbjct: 295 cgagaaggttttattcagaaggtcaaagatgaagaaggtgaagggtgtaatatatatgga 354
Query: 247 ttcttggaagttaataaggtggccggtaattttcactttgcacctggcaaaagttttcaa 306
| ||||||| ||||| || || || |||||||| ||| ||||||| ||| || ||||
Sbjct: 355 tctctggaagtaaataaagtagctggaaattttcatttttcacctgggaaaggtcttcat 414
Query: 307 caatcaaatgttcatgtgcatgatctgctggcgtttcaaaaggacagttttaatataagt 366
|| |||| | | | || ||| |||| | |||||| ||| |||| ||||||||||
Sbjct: 415 cagtcaagcttctttatacaagatttgcttgtttttcaaggggatagttataatataagt 474
Query: 367 cacaaaattaataggctcactttcggagaatattttcctggtgttgtaaatcctcttgat 426
|||| || |||||||| | || || || || ||||||||||| |||||||||||||||
Sbjct: 475 cacacgatcaataggctagcctttggtgactactttcctggtgtagtaaatcctcttgat 534
Query: 427 ggcgtgcattggacacaagaaactccaagtgggatgtaccagtattttctcaaggt 482
|| || | ||| || ||||| |||| ||| ||| |||||||||| ||||||||
Sbjct: 535 ggggttccgtgggtgcatgaaacaccaaatggcatgcaccagtatttcctcaaggt 590
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 588 tcctggagttttcttcttttatgacctttctccaattaaggtg 630
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 696 tcctggtgttttcttcttttatgacttttctccaattaaggtg 738