Jatropha Genome Database

JcCB0011561.40
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0011561.40 + phase: 0 
         (399 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007162 NADH dehydrogenase, putative                            262   1e-69

>30131.m007162 NADH dehydrogenase, putative
          Length = 399

 Score =  262 bits (132), Expect = 1e-69
 Identities = 207/232 (89%)
 Strand = Plus / Plus

                                                                       
Query: 163 tccagcatcgcctctcagatccgcaagaactccaacgtcaccaatcccaaggtgattgat 222
           ||||||||||| ||||||||||| |  |||||  | ||| ||||||||||||||||||||
Sbjct: 163 tccagcatcgcttctcagatccgtataaactctcatgtctccaatcccaaggtgattgat 222

                                                                       
Query: 223 atgctgctattcaaaggaatggaagagctgaacaacattgtagaacatgcaaagcagcgt 282
           ||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 223 atgttgcttttcaaaggaatggaagagctgaacaacattgtggagcatgcaaagcagcgc 282

                                                                       
Query: 283 catcatattattggccaatatgtagtgggtcagcatgggcttgtgcaggatttggacagt 342
           || ||||||||||| ||||||||||||||| | || |||||||||||||||||||||| |
Sbjct: 283 caccatattattggacaatatgtagtgggtgaacaagggcttgtgcaggatttggacact 342

                                                               
Query: 343 aaagatcaaggcatgtccgacttcctcaagaacttctacaagagcaactact 394
           || |||||||  ||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 343 aaggatcaagcgatgtctgacttcctcaagaacttctataagagcaattact 394