Jatropha Genome Database

JcCB0011561.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0011561.20 + phase: 0 
         (567 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007171 electron transporter, putative                          371   e-102

>30131.m007171 electron transporter, putative
          Length = 807

 Score =  371 bits (187), Expect = e-102
 Identities = 301/339 (88%)
 Strand = Plus / Plus

                                                                       
Query: 181 actcaaccaagaagactgctttgcagacctcctctgggcaagtatgttagagaagactat 240
           ||||| ||||||||||| ||||||||||| ||    || |||||||||||||||||||||
Sbjct: 184 actcacccaagaagactcctttgcagacccccaaatggaaagtatgttagagaagactat 243

                                                                       
Query: 241 cttgtgaaaaagaagtcagcacaagagatacaggagctggtaaggggagaaagaaatgtg 300
           |||||||||||||| ||||| || |||||||||||  |||| ||||||||||||||||||
Sbjct: 244 cttgtgaaaaagaaatcagctcaggagatacaggaattggttaggggagaaagaaatgtg 303

                                                                       
Query: 301 ccgattatcattgatttttatgccacttggtgtggaccttgtattttgatggcccaagaa 360
           ||  |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 304 cctcttattattgatttctatgcaacttggtgtggaccttgtattttgatggcccaagaa 363

                                                                       
Query: 361 cttgaaatgcttgctgtggaatatgagagtaatgccattattgttaaggtcgatactgat 420
           ||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 364 cttgaaatgcttgctgtggaatatgagagcaatgcaatgattgttaaagttgatactgat 423

                                                                       
Query: 421 gaagagtatgagtttgcacatgacatgcaggttcgaggtttgccaacgctgttcttcatt 480
           || |||||||| ||||||| ||| |||||||| ||||||||||||||  |||| ||||| 
Sbjct: 424 gatgagtatgaatttgcacgtgatatgcaggtccgaggtttgccaacagtgtttttcatc 483

                                                  
Query: 481 agtccagatccaaaaaaggatgcaatccgaacagaaggg 519
           || ||||||||||| || ||||||||||| || ||||||
Sbjct: 484 agcccagatccaaataaagatgcaatccggactgaaggg 522