Jatropha Genome Database
- JcCB0011311.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0011311.10 + phase: 0 /pseudo/partial
(1425 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m010889 coatomer gamma subunit, putative 1526 0.0
>30190.m010889 coatomer gamma subunit, putative
Length = 2664
Score = 1526 bits (770), Expect = 0.0
Identities = 1263/1426 (88%), Gaps = 1/1426 (0%)
Strand = Plus / Plus
Query: 1 agaaggtggatttgagtataaaa-ggcaattgtagattccatagtcattctcatcagtga 59
||||||||| ||||| ||||||| ||||||||||||||||||||| || |||||||| ||
Sbjct: 1236 agaaggtggctttgactataaaaaggcaattgtagattccatagtaatcctcatcagaga 1295
Query: 60 tatccctgaagctaaggaaagtgggttgcttcatttgtgtgagttcattgaagattgtga 119
||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1296 tatccctgatgcaaaggaaagcgggttgcttcatttgtgtgagtttattgaagattgtga 1355
Query: 120 atttacatatctttcgacacagatactccattttcttgggattgaagggccaaagacctc 179
||||||||| || || |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 1356 atttacatacctctcaacacagattctccattttctggggattgaagggccaaagacctc 1415
Query: 180 ggatcccagcaaatacatacgctacatctacaatcgcgtacatcttgagaatgcaaccgt 239
|| ||||||||||| ||||||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 1416 agaccccagcaaatatatacgctacatttacaatcgtgtgcatcttgagaatgcaactgt 1475
Query: 240 tcgggctgctgccgtgagcacgttagcccagtttggtgctttggttgacacattgaagcc 299
|||||| ||||| ||||| || ||||| |||||||||| | ||||| | || |||||
Sbjct: 1476 tcgggccgctgctgtgagtacattagcaaagtttggtgcccttgttgatgcgttaaagcc 1535
Query: 300 tcgcatttttgttctgctgagacgttgtctttttgacagtgatgatgaggttcgcgatag 359
||||||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 1536 tcgcatttttgttcttctgagacgctgtctctttgacagtgatgacgaggttcgtgatag 1595
Query: 360 ggcaacactttatcttaatactcttggtggcgacggtgaagtagttgaaactgataaaga 419
||||||||| ||||| || || |||||||| || |||||| | ||||||||||||||| |
Sbjct: 1596 ggcaacactgtatctgaacacacttggtggtgatggtgaaattgttgaaactgataaaaa 1655
Query: 420 tgtacaagcttttctttttggtccactagatatcccactatttaacttggagacaagttt 479
|| |||| |||||| ||||||||| | ||||| ||| || ||||| |||||||||||||
Sbjct: 1656 cgtgcaagattttctctttggtccattggatattccattagttaacctggagacaagttt 1715
Query: 480 gaaaaattatgagccatcagaagagccttttgatattcattctgtgccaaaggaagttaa 539
|||||| ||||||||||||||||||||||||||| || ||||||| |||| |||||||||
Sbjct: 1716 gaaaaaatatgagccatcagaagagccttttgattttaattctgtaccaagggaagttaa 1775
Query: 540 gtctcagccacttgcagagaagaaagccccaggcaagaagccaactggtctcggttctcc 599
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 1776 gtctcagccacttgcagagaagaaagccccagggaagaagccaactggtcttggtgctcc 1835
Query: 600 tccagctggtcccccatctactgttgatgcctatgaaaagcttatttcctccatcccaga 659
|||| ||||||| |||||||| |||||||| ||||||| |||| ||||||| ||||| ||
Sbjct: 1836 tccaactggtcctccatctaccgttgatgcatatgaaaggcttctttcctctatccctga 1895
Query: 660 gttctcgaactttgggaagctcttcaagtcatcggcacctgtggaacttacagaagcaga 719
|||||| |||||||||||||| |||||||| || ||||||||||| ||||||||||||||
Sbjct: 1896 gttctcaaactttgggaagcttttcaagtcctcagcacctgtggagcttacagaagcaga 1955
Query: 720 gacagaatatgctgttaatgctgttaagcatatttttgatgggcatgttgtcttccagta 779
|||||||||||||||||||| ||||||||||||||| ||||| ||||| || ||||| ||
Sbjct: 1956 gacagaatatgctgttaatgttgttaagcatattttcgatggacatgtcgtgttccaata 2015
Query: 780 caattgcaccaatacaataccagagcaattactggaaaatgttatggttattgtagatgc 839
|||||||||||||||| |||| || ||||||||||||||||||| ||| |||| |||||
Sbjct: 2016 caattgcaccaatacagtaccggaacaattactggaaaatgttactgttgttgtggatgc 2075
Query: 840 ttcagaagcagaggaattttcagaggtagcatccaagcctttaagatctctcccttacga 899
||||||||||||||| ||| |||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 2076 ttcagaagcagaggattttgcagaggtagcgtccaagcccttaagatctcttccttatga 2135
Query: 900 ttcacctggacaaacttttgtggcttttgagaagccagagggagtccctgcagtcgggaa 959
|||||||||||| ||||| ||||| |||||||||| ||||||||| || ||||| || ||
Sbjct: 2136 ttcacctggacagactttcgtggcatttgagaagctagagggagtgccagcagtaggaaa 2195
Query: 960 gttttcaaatatgttgagattcattgttaaagaggttgatccaactactggtgaagcaga 1019
||||||||||||||||||||| ||||| || |||||||||| ||||||||||||||||||
Sbjct: 2196 gttttcaaatatgttgagatttattgtaaaggaggttgatcaaactactggtgaagcaga 2255
Query: 1020 tgaagatggtgtggaggatgaataccaacttgaggaactggaggtcgttgcagcagatta 1079
|||||||| ||||||||||||||||| |||||||| || ||||| || || ||||||||
Sbjct: 2256 ggaagatggcgtggaggatgaataccagcttgaggaccttgaggttgtcgcggcagatta 2315
Query: 1080 catgatgaaagttggggtatccaatttcaggaatgcatgggaaagcatgggccctgattg 1139
|||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2316 tatgatgaaagttggcgtttccaatttcagaaatgcatgggaaagcatggggcctgattg 2375
Query: 1140 tgaacgagtggatgaatatggccttggccctagagagagcttgtctgaagctgttagtgc 1199
|| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||||
Sbjct: 2376 cgagtgcgtggatgaatatggccttggcgcaagagagagcttggctgaagctgttagtgc 2435
Query: 1200 tgtcatcaaccttcttggcatgcagccttgtgagggcacagaggttgtcgcaagcaattc 1259
|||||||||||| |||||||||||||| ||||||||||| ||||||||| | ||||||||
Sbjct: 2436 tgtcatcaacctgcttggcatgcagccctgtgagggcacggaggttgtccccagcaattc 2495
Query: 1260 acggtcgcatacctgcctactatctggtgttttcattggcaatgtgagggttctcgtgcg 1319
| |||| || |||||| | |||||||| ||||| ||||||||||||| ||| || || |
Sbjct: 2496 aaggtcacacacctgcgtgctatctggagtttttattggcaatgtgaaggtacttgtaca 2555
Query: 1320 attgcaatttggaattgatggtgcaagggatgttgcgatgaaactggctgtcagatctga 1379
|||||||||||||| |||||| | | ||| || || |||||| ||||||| ||||| ||
Sbjct: 2556 gttgcaatttggaatagatggtcctaaggaggtagcaatgaaattggctgttagatccga 2615
Query: 1380 agatgaatctgtcagtgatgccattcacgagattgtagcaagcggc 1425
||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2616 ggatgaatctgtgagcgatgccattcatgagattgtagcaagcggc 2661