Jatropha Genome Database

JcCB0011301.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0011301.20 + phase: 0 
         (327 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008993 flap endonuclease-1, putative                           139   1e-32

>30128.m008993 flap endonuclease-1, putative
          Length = 1038

 Score =  139 bits (70), Expect = 1e-32
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagagcagaaatttgagagctattttggccgaaagattgccattgatgccagcatg 60
           |||||||||||||| |||||||||||||||||||| ||||| || ||||| || ||||||
Sbjct: 52  atgaaagagcagaagtttgagagctattttggccgcaagatcgctattgacgctagcatg 111

                                                                       
Query: 61  agcatttaccagttccttattgtggtggggagaactgggtcggaaatgctgactaatgag 120
           ||||| ||||||||||||||||| || || |||| |||  | |||||| |||||||||| 
Sbjct: 112 agcatctaccagttccttattgtagtaggaagaagtggaactgaaatgttgactaatgaa 171

                             
Query: 121 gctggcgaagtcactagt 138
           ||||| ||||||||||||
Sbjct: 172 gctggtgaagtcactagt 189