Jatropha Genome Database
- JcCB0011271.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0011271.10 - phase: 0
(1521 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004006 hypothetical protein 315 4e-85
>30138.m004006 hypothetical protein
Length = 1422
Score = 315 bits (159), Expect = 4e-85
Identities = 515/631 (81%), Gaps = 2/631 (0%)
Strand = Plus / Plus
Query: 403 tctttacttttgcgttatcctccacgaaaagcaattccaattggatcgaatcatcaagct 462
||||||||||||| ||||||||||| | ||||| ||||||||||||| ||| ||||||||
Sbjct: 202 tctttacttttgcattatcctccacaagaagcagttccaattggatcaaattatcaagct 261
Query: 463 gatattccagaatggaacccttatgatagtaagactacaataaaatcttcaggcacatct 522
|| ||||||||||||| ||| ||||||| |||| || | ||||||| ||||| ||| ||
Sbjct: 262 gagattccagaatggagtcctcatgatagcaagagtaaattaaaatcctcaggtacacct 321
Query: 523 ggtatgtgtccggatactaacctt-cttcttgagcggaaagatgaaaatagactgatggg 581
|| || || |||| | |||||| ||||| | | | |||||||| |||||||| |||||
Sbjct: 322 ggagtgattctggatgccaaccttgcttctggggag-aaagatgagaatagactaatggg 380
Query: 582 aacttgtgtcattccaatgcctgaatttggacttgctgctaaagttggcaatgttaggat 641
||||||||||||||||||||||| || | | || | ||||| ||||| | ||
Sbjct: 381 tacttgtgtcattccaatgcctgatttcaaatgtattgacgaggttggaaatgtcaagaa 440
Query: 642 agactgcaactgccttgaaaagggttctattgtatgtgtcaaacagcacattgttgaagc 701
|| |||| ||||| || |||||||||| |||||||| ||| |||||| | ||||
Sbjct: 441 tgattgcagttgcctggatgagggttctatcagatgtgtcagacaacacattttaaaagc 500
Query: 702 aagagagaatcttaagagaatccttgggaaggagagatttgagcagctggggttttgtga 761
||| ||||| |||||||| ||||||||| |||||||||| || | ||||||| |||||
Sbjct: 501 aagggagaaagttaagagagtccttgggatggagagatttaaggacttggggttctgtga 560
Query: 762 aatgggagagcaagtggcagagaaatggagtgaaggggaagaacaattattccgtgaggt 821
||||||||| ||| ||||||| |||| ||| | ||||||||||||||||| ||||||
Sbjct: 561 catgggagaggcagtttcagagaattggactgaggaggaagaacaattattccatgaggt 620
Query: 822 tgtattttcaaatcctgcatcattgggcaagaacttttgggagcttctttcttccgtttt 881
||||||||||||||| | ||| ||||||||||||||||| | ||||||| | | |||
Sbjct: 621 tgtattttcaaatcccgtgtcactgggcaagaacttttggagccatctttctgctgcttt 680
Query: 882 cccttcccgaagcaaaaaggatattatctcctactactttaatgtatttatgcttagaag 941
||||| |||| |||||| |||||| ||| |||||| || ||||| ||||||||| |||
Sbjct: 681 cccttttcgaaccaaaaaagatattgtctgctactatttcaatgtctttatgcttcaaag 740
Query: 942 gcgagctgaacagaacagatgtaattcaatgaatgttgatgacagtgataatgatgagtg 1001
|||||||||||||||| |||| || || |||| || ||||||||||||||||||||||
Sbjct: 741 gcgagctgaacagaaccgatgcaagtctatgagcatttatgacagtgataatgatgagtg 800
Query: 1002 gcaggagagtgatgattatggtgacagcaaa 1032
||| |||||||||||||||| || |||||||
Sbjct: 801 gcatgagagtgatgattatgatggcagcaaa 831
Score = 117 bits (59), Expect = 2e-25
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 1403 tttgggatgctggttacttggtatgccctaaaggtaacgttgaccttttacctacttgca 1462
||||||||||||||||| || ||||||||||| |||| || ||||||||||||||||| |
Sbjct: 1262 tttgggatgctggttacatgatatgccctaaaagtaaagtcgaccttttacctacttgta 1321
Query: 1463 gtatgattgaagaggtttttggaaaagaatcatggaact 1501
|||||||||||||||| |||||| | | |||||||||||
Sbjct: 1322 gtatgattgaagaggtatttggagatggatcatggaact 1360
Score = 79.8 bits (40), Expect = 4e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 1 atggtactaaaaaggcctttttatgatgaggaactgtacaatatttcttccaaacaccca 60
||||||| ||||| ||||| ||| |||||||| || ||| || ||||||||||||| |
Sbjct: 1 atggtacagaaaagacctttctataatgaggaattggacagcatatcttccaaacaccaa 60
Query: 61 agacaggtggattacaataatcggctggtctctttttcagaatttgttcctc 112
||||| ||||| |||||||||| ||| || || ||| |||||||||||||||
Sbjct: 61 agacaagtggaatacaataatcagcttgtttcatttccagaatttgttcctc 112