Jatropha Genome Database
- JcCB0010841.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0010841.10 + phase: 0 /partial
(855 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28644.m000929 Shikimate kinase, chloroplast precursor, putative 194 6e-49
37321.m000013 conserved hypothetical protein 178 4e-44
>28644.m000929 Shikimate kinase, chloroplast precursor, putative
Length = 849
Score = 194 bits (98), Expect = 6e-49
Identities = 406/514 (78%), Gaps = 21/514 (4%)
Strand = Plus / Plus
Query: 158 attggctgctaaagacaaaggggcaagaagtcgccttatgcttaaatggatgcagtctat 217
||||| || ||||||| |||||| || |||| |||| | ||||||| ||||| | | |
Sbjct: 257 attggttgttaaagaccaaggggaaaaaagttgcctcaggcttaaagggatgttgcgtgt 316
Query: 218 ttcttgttggaatgatgggagctggaaaaacaacgacgggcaagattttatcagaagcac 277
||||||||||||||||||| ||||||| || || |||||||||||||||||||||||
Sbjct: 317 ttcttgttggaatgatgggctctggaaagactacagtgggcaagattttatcagaagcac 376
Query: 278 taggttatacttttgtggacagacaacatattttggcatgcagtgacaaatatgtagagc 337
|||||||||||||||| ||||| |||| ||||||||||||
Sbjct: 377 taggttatacttttgttgacag---------------------tgacgaatatgtagagc 415
Query: 338 aagctactggtggcattagtgtggcccatatatatgagcagtacggcgagaatttcttca 397
|| || | || || | | |||| ||||||||| | | || ||||||||| ||| ||| |
Sbjct: 416 aaactgcaggaggaaattctgtgtcccatatatttcaacaatacggcgaggattacttta 475
Query: 398 gagattttgagagtgaggcattgcataagctatgtttagttcctcagcaagttgttgcta 457
||||| ||||||| ||||||||||| ||| | | | || | |||| |||||| |||||||
Sbjct: 476 gagatattgagagcgaggcattgcagaagttgtctataatccctcggcaagtagttgcta 535
Query: 458 caggtggtggtgcggttgttcggccagtaaactggaaatatatgagccaaggaataactg 517
||||||||||| | || || || ||| | ||||||||||||||||| || || || ||||
Sbjct: 536 caggtggtggttcagtagtacgtccaatcaactggaaatatatgaggcaggggatcactg 595
Query: 518 tattcttagatgtaccgttggacacattggcaaagagaattgctgcattagggactgatt 577
| |||||||||||||| ||||| ||||||||| ||||||||||| |||| ||||| |
Sbjct: 596 ttttcttagatgtacctttggatgcattggcaagaagaattgctgctgtaggaactgact 655
Query: 578 ctcgtcctctgcttcattttgattctggggattcttacaaaaaggcttttatgggacttc 637
||||||| || || || ||||||||||||| | |||| ||||||||||||||||||
Sbjct: 656 ctcgtccacttctacaccttgattctggggacccctacacaaaggcttttatgggactct 715
Query: 638 ttgctctttcgaaaaaccgatttcaggcctattc 671
|| ||||||||||||| || || ||||||||||
Sbjct: 716 ttactctttcgaaaaagagagttgaggcctattc 749
>37321.m000013 conserved hypothetical protein
Length = 543
Score = 178 bits (90), Expect = 4e-44
Identities = 288/354 (81%)
Strand = Plus / Plus
Query: 318 cagtgacaaatatgtagagcaagctactggtggcattagtgtggcccatatatatgagca 377
||||||| |||||||||||||| || | || || | | |||| ||||||||| | | ||
Sbjct: 54 cagtgacgaatatgtagagcaaactgcaggaggaaattctgtgtcccatatatttcaaca 113
Query: 378 gtacggcgagaatttcttcagagattttgagagtgaggcattgcataagctatgtttagt 437
||||||||| ||| ||| |||||| ||||||| ||||||||||| ||| | | | || |
Sbjct: 114 atacggcgaggattactttagagatattgagagcgaggcattgcagaagttgtctataat 173
Query: 438 tcctcagcaagttgttgctacaggtggtggtgcggttgttcggccagtaaactggaaata 497
|||| |||||| |||||||||||||||||| | || || || ||| | |||||||| ||
Sbjct: 174 ccctcggcaagtagttgctacaggtggtggttcagtagtacgtccaatcaactggaagta 233
Query: 498 tatgagccaaggaataactgtattcttagatgtaccgttggacacattggcaaagagaat 557
|||||| || || || ||||| |||||||||||||| ||||| ||||||||| |||||
Sbjct: 234 tatgaggcaggggatcactgttttcttagatgtacctttggatgcattggcaagaagaat 293
Query: 558 tgctgcattagggactgattctcgtcctctgcttcattttgattctggggattcttacaa 617
|||||| |||| ||||| |||||||| || || || ||||||||||||| | ||||
Sbjct: 294 tgctgctgtaggaactgactctcgtccacttctacaccttgattctggggacccctacac 353
Query: 618 aaaggcttttatgggacttcttgctctttcgaaaaaccgatttcaggcctattc 671
|||||||||||||||||| || ||||||||||||| || || ||||||||||
Sbjct: 354 aaaggcttttatgggactctttactctttcgaaaaagagagttgaggcctattc 407